| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
aalm Aureimonas altamirensis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:aalm00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LUX29_16870 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:aalm03021]
LUX29_16870 (rpoC)
03400 DNA repair and recombination proteins [BR:aalm03400]
LUX29_16870 (rpoC)
Enzymes [BR:aalm01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LUX29_16870 (rpoC)
Transcription machinery [BR:aalm03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LUX29_16870 (rpoC)
DNA repair and recombination proteins [BR:aalm03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LUX29_16870 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(3495126..3499310)
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| AA seq |
1394 aa
MNQEVMNLFNPQVQAQSFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQLLTEEEYMIATEEYGEDSFTA
LIGAEAIQELLSSMDLEKIAGDLRAELAETTSDLKTKKLMKRLKIVENFLESGNRPEWMI
MSVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQL
EARVLMMSTNNILHPANGQPIIVPSQDMVLGLYYLSIMNENEPGEGMAFSDIGEMEHALH
AKSITLHTKIRGRFKSVDKDGNLVSKVYETTPGRLLIGQLLPKNVNIPFDIANELMTKKN
ISRLIDQVYRHCGQKETVIFCDRIMQLGFKHACMAGISFGKDDMLIPDTKEKLIAETQAL
AKEYEQQYNDGLITQGEKYNKVVDAWAKCTDKIADEMMARIKAVEFDDGGRQRPMNSIYM
MSHSGARGSPTQMRQLAAMRGLMTKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIITQSDCGTQNGLTMQPIVDAGQVVATLGQRVLGRTA
LEDVLHPVSGDVLVAGGHNIDERDVEVIEKAGVQSIKIRSALTCEVRTGICAVCYGRDLA
RGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDQSFLEASYEGTVKIRNRNV
VRDSEGRLVAMGRNMAILILDQGGKERASHRVTYGSRIFVDDGDQVRRGQRIAEWDPYTR
PVLTELEGTVEFEDLVEGLSVSEQADESTGITKRQVIDWRANPRGSDLKPAIVIKGPDGE
VLKLQRGSDARYLLSVDAILSVEPGTKIKAGDVLSRIPMESAKTKDITGGLPRVAELFEA
RRPKDNAVIAEIDGTVRFGRDYKNKRRIVIEPHEDGVEPVEYLIPKGKPFHLQEGDIIEK
GDYILDGNPAPHDILAIRGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEI
VDSGDSGYIPGDNVDRIELAELNEKLEEEGKKPASGVPVLLGITKASLQTPSFISAASFQ
ETTRVLTEAAVAGKTDTLQGLKENVIVGRLIPAGTGGMMTQIRRIATSRDDLIIDDKRKT
SAAGQPDNLLSDMS |
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| NT seq |
4185 nt +upstreamnt +downstreamnt
atgaatcaagaggtcatgaatctcttcaatcctcaggtgcaggcccagtctttcgattcg
atccggatctcgctggcgagcccggagaagatcctttcctggtcgttcggcgagatcaag
aagcccgagacgatcaactaccggaccttcaagcccgagcgcgatggcctgttctgcgct
cgtatcttcggtccgatcaaggattacgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgagaagtgcggcgtcgaggttaccttgtcgcgcgtgcgccgc
gagcgcatgggccacatcgagctggccgcgccggtcgctcacatctggttcctgaagtcg
ttgcccagccgcatcggcacgctgctcgacatgacgctcaaggatatcgagcgcgtcctg
tacttcgagaactacatcgttaccgagccaggtctcaccgccctcaaggagcatcagctc
ctgacggaggaggagtacatgatcgccaccgaggagtatggtgaagattccttcaccgcg
ctcatcggcgccgaggcgattcaggaactcctgtcctccatggacctggagaagatcgcc
ggcgacctgcgcgccgagctggccgagacgacatccgatctgaagacgaagaagctgatg
aagcgtctcaagatcgtcgaaaacttcctggagtcgggcaaccggcccgaatggatgatc
atgagcgtcgttccggtgatcccgccggacctgcgtccgctggtgccgctggatggcgga
cgtttcgcgacgtccgacctcaacgacctgtaccgtcgcgtcatcaaccgtaacaaccgc
ctcaagcggctgatcgagttgcgtgcgccgggcatcatcatccgcaacgaaaagcgcatg
ctgcaggaggctgtcgacgccctgttcgacaacggccgccgcggtcgcgtcatcacgggc
gccaacaagcgtccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgcttc
cggcagaacctgctcggcaagcgcgtcgactattccggccgctccgtcatcgtgaccggc
ccggaactgaagcttcatcaatgcggcctgccgaagaagatggcgctcgagctgttcaag
ccgttcatctatgcgcgccttgatgccaagggctattcgtcgaccgtcaagcaggcaaag
aagctggtcgagaaagagcgtccggaagtctgggatatcctggacgaggtcatccgcgag
cacccggttctcctgaaccgcgcgccgacgctgcaccgtctcggcatccaggccttcgaa
ccgatcctcatcgagggcaaggcgatccagcttcatccgctggtctgcacggccttcaac
gccgacttcgacggcgaccagatggccgtccacgttccgctgtccatcgaggcgcagctg
gaagcgcgcgtccttatgatgtcgacaaacaacatcctgcacccggccaatggtcagccg
atcatcgtgccgtcgcaggacatggttcttggcctctactacctctcgatcatgaacgag
aacgagcccggggagggcatggcgttctccgacatcggcgagatggagcatgcgctgcac
gccaagtcgatcacactgcacaccaagatccggggtcgtttcaagtccgtggacaaggac
ggcaatctcgtctccaaggtctacgagacgacgccgggccgtctgctgatcggtcagctc
ctgccgaagaacgtgaacattcccttcgacatcgccaacgagctgatgacgaagaagaat
atctcgcgcctcatcgaccaggtctaccgtcactgcggtcagaaggagacggtgatcttc
tgcgaccgcatcatgcagcttggcttcaagcatgcatgcatggccggcatttccttcggc
aaggatgacatgctcatccccgacacgaaggaaaagctgatcgccgagacgcaggcgctc
gcgaaggaatacgagcagcagtacaatgacggcctgatcacccagggcgagaagtacaac
aaggtggtcgacgcctgggccaagtgcacggacaagatcgccgacgagatgatggcccgc
atcaaggcggtcgagttcgacgatggcggtcgccagcgtccgatgaactcgatctacatg
atgtcgcactccggtgcgcgcggctcgccgacgcagatgcgccagcttgcagcgatgcgc
ggtctgatgaccaagccttcgggcgagatcatcgagacgccgatcatctcgaacttcaag
gaaggcctgacagttctcgagtacttcaactctacccacggcgcccgcaagggcctcgcg
gacacggcgttgaagacggccaactcgggctacctgacgcgtcgtctcgtcgacgtggcg
caagactgcatcatcacgcagtccgactgcggcacgcagaacggcctgaccatgcaaccc
atcgtcgatgccggccaggtggtcgcgacgctggggcagcgtgtcctgggccgcaccgcg
ctggaggatgtcctccatcccgtctcgggcgacgtgctcgtggcaggtggacacaacatc
gacgagcgcgatgtcgaggtgatcgagaaggccggcgtgcagtcgatcaagatccgctcc
gcgctgacctgcgaagtccgcacgggcatctgcgcggtctgctacggacgcgatctggca
cgcggtacgcccgtcaacatgggcgaggccgtcggcgtcatcgcggcgcagtcgatcggc
gagccgggcacgcagctcaccatgcgtaccttccacatgggcggtacggcgcaggtcgtc
gaccagtccttcctggaggcctcgtatgagggcacggtcaagatccgcaaccgcaacgtg
gtgcgtgactccgaagggcgtctcgtggccatgggccgcaacatggcgatcctgatcctc
gatcagggcggcaaggagcgggccagccaccgggtgacctacggttcgcgtatcttcgtc
gacgatggcgaccaggtgcgtcgtggtcagcgtatcgccgagtgggacccctatacccgc
ccggttctgaccgagctggaaggcaccgtcgagttcgaggatctggtcgagggcctgtcg
gtctccgagcaggccgacgagtcgaccggcatcaccaagcgtcaggtcatcgattggcgc
gccaacccgcgcggttcggacctgaagccggcgatcgtcatcaagggccccgatggcgag
gtgttgaagctgcagcgcggctccgacgcacgctatctcctgtccgtcgatgcgatcctg
tcggtggagccaggcaccaagatcaaggcgggtgacgtcctgtcgcgtattccgatggaa
agcgcgaagacgaaggacatcaccggtggtctcccgcgcgtcgccgagttgttcgaggct
cgtcgtccgaaggacaatgccgtgatcgccgagatcgacggcacggttcgcttcggccgc
gactacaagaacaagcgtcgcatcgtcatcgagccgcacgaggacggcgtcgagccggtg
gagtatctcatcccgaagggtaagccgttccatctccaggaaggcgacatcatcgagaag
ggcgactacatcctcgacggcaacccggccccgcacgacatcctggcgatccggggcgtc
gaggcgctggcttcctatctcgtcaacgagattcaggaagtgtatcgcctgcagggcgtg
ctcatcaacgacaagcacatcgaggtgatcgtccggcagatgctgcagaaggtcgagatc
gtcgactcgggcgactccggctatatcccgggcgacaatgtcgaccggatcgagctggcc
gagctgaacgagaagctggaagaggagggcaagaagcccgcctccggcgtgccggtgctg
cttggcatcaccaaggcctcgctgcagacaccgtccttcatctcggcggcgtccttccag
gagacgactcgcgtcctcaccgaggcggcggttgccggcaagaccgacacgctgcagggc
ctcaaggagaacgtgatcgttggccgcctgattcccgccggcaccggtggaatgatgacg
cagatccggcgtatcgcgacctcgcgggacgacctgatcatcgatgacaagcgcaagacg
tcggctgctggtcagcccgacaaccttctgtccgacatgtcctga |
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