Aureimonas altamirensis: LUX29_22335
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Entry
LUX29_22335 CDS
T07762
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
aalm
Aureimonas altamirensis
Brite
KEGG Orthology (KO) [BR:
aalm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalm03400
]
LUX29_22335 (addA)
Enzymes [BR:
aalm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LUX29_22335 (addA)
DNA repair and recombination proteins [BR:
aalm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LUX29_22335 (addA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UHD45687
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All DBs
Position
4581806..4585351
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AA seq
1181 aa
AA seq
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MSSLSVSATTVHAQERASDPSLSVFVAANAGSGKTHVLTMRVVRLLLSGVSPGRILCLTY
TKAAAAEMQARVFATLSRWTRADDDTLGKELATLRGGTPGDVRAARRLFATALETPGGLK
IQTIHAFCEAILHQFPLEANVPGHFQVMDDGESALLLAEARRLLVVLARLDGGTGADPVL
AEAFAEALELAGEAGLDGLINACIARRDRIGAFIEGNSGPENAVRALRQALGVGDTDPLA
GMVDPPGFDAAFCGQLGQEAAQAGGSTNDKLCEKLVRLAASQTAQERYSVLRSLVFTAKG
DRYKLGSIATKAVVAAVPELESRLAMLGDFLDACAERIATERLFRASRAALVIADRLERD
YRALKQRRGKLDFEDLIVRTADLLLRREASAWVHYKLDRGIDHVLVDEAQDTSLRQWQVV
RALVDEFFHGAGESRRRTVFAVGDEKQSIYSFQGASPAMFAQERRRLEQLAARSGQPFHR
VGLHQSFRSAAEILSAVDTIFADETRRRGLSSEGEAPVHESARAAQGGLVEVWPTVRPLP
AAETDDDWLQPIDHQPLDAPIHRLARRIAGQIEAWVGTPVEVKGVTRPLDAGDVIILVRK
RSAFVSAMGAAIRALGNPAIRVAGADRLTITDHLAVQDLMAIGRTVANAEDELSLAEALK
SPIFGFSDDDLMALALSRGKGGRPQSLYLALRKLAGGIDPARLQPFGVDAEALAGRARSA
FERLETLRDRAGYTGVYGFYARLLGPEGGRTALSARLGRDTGEVLDAFLDLALTAEQDGR
AGLDAFLADLAANPPVVRREMTPLKGEVRIMTVHAAKGLEAPAVFLVDPGSEPFTASHAA
RLIEWEGMPGQPPESQPGFLWCPDKSCRNAEIDRLAALERGRAEDEYRRLLYVGLTRAAD
RLVVCGYSGIREPSADSWAAHVRDSLGEAAEAISDPSGAVVAWRIGTPPQGRMAEAVQAA
PARPAAMDLSPLPPEEIGPRPLTPSTAGSQTIERFEGPAWRSPVLDGPADPAFALLRGQM
AHRLLQVLPDLAEEARADAARSYVVRCAPAWPAAEREKLIEEVDAVLREPAFAPIFAPAS
RAEVAIAGTVELDGRRLPVNGLIDRLAVEADRVLLVDYKTNRPVPQDAAAIPEAHRRQMA
LYAALLAPLFPDRRIEAALLYTEGPVLHRLEPEALSLQPAA
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtctttccgtttccgccaccacggtccacgcgcaggagcgtgcctccgatccg
tcgctgtcggttttcgtggcggccaatgccggctccggcaagacgcacgtcctgacgatg
cgggtggtgcggctattgctgtccggcgtcagcccgggccgaatcctgtgccttacctat
acgaaggcggcggcggcggagatgcaggcccgcgtcttcgccaccctgtcgcgatggacg
cgcgccgacgacgacaccctcggcaaggagctggccaccttacgcggcggcacgccgggc
gatgtcagggccgcgcgccgcctgttcgccaccgctctggaaacgccgggcggcctgaag
atccagaccatccacgccttctgcgaagccatcctgcatcagtttccgctggaggcgaac
gtacccggccacttccaggtgatggacgatggcgaaagcgcgctgcttctggccgaggcg
cgccgcctcctggtggtgctggcccggctggacggcggcaccggcgcggacccggtgctg
gccgaggcctttgccgaggcactcgaacttgcgggcgaagcaggcctcgacgggttgatc
aatgcctgcatcgcccggcgcgaccgtatcggcgccttcatcgagggcaatagcggcccg
gagaatgccgtccgggcactgcggcaggcgctgggcgtcggcgacacggacccgctcgcc
ggcatggtcgatccaccgggtttcgatgccgccttctgcgggcagctcggccaggaagcg
gcgcaggcgggcggctccacgaacgacaagctctgcgaaaagctggtgcgccttgcggcc
tcgcagactgcccaggagcgatattccgtcctccgatcgctggtcttcacagcaaagggc
gatcgctacaagctcggcagcatcgccaccaaggccgtcgtggcggctgtgccggagctt
gaatcccggctggcgatgctgggcgacttcctcgacgcctgcgccgaacgaattgcaacc
gagcggctgtttcgtgccagccgcgcggccctcgtgatcgccgatcggctggagcgcgat
tatcgcgccctgaagcagcggcgcggcaagctggatttcgaggatctgatcgtccgcacg
gccgatcttctgctgcgccgcgaagcctcggcctgggtgcactacaagctcgacaggggt
atcgaccacgtgctcgtcgacgaggcgcaggatacgagcctgcgccagtggcaggtggtg
cgggcgctggtggacgaattcttccacggtgccggcgagtcgcgccggcgcaccgtcttt
gccgtcggcgacgagaagcagtccatctattcgttccagggtgcatcgccggcgatgttc
gcgcaggagcggcggcggctggagcaactggcggcgagatcgggccagcccttccaccgc
gtcgggttgcaccagtccttccgctccgcggccgaaatcctgtcggcggtcgacacgatc
ttcgccgacgagacccgccgtcgcggcctgtccagcgagggcgaagcaccggtgcacgaa
tccgcgcgtgccgcccaggggggactggtcgaggtgtggccaaccgtcaggccgcttccc
gccgccgaaaccgacgacgattggctgcagcccatcgaccatcagccgctggacgcaccg
atccaccgcctggcccggcggatcgcggggcagatcgaggcatgggtcggcacgcccgtc
gaagtgaagggggtgacccgcccactggacgcgggcgacgtcatcatcctggtgcgcaag
cgctcggccttcgtgtccgccatgggcgccgccatccgggcgctgggcaatccggccatc
cgcgtcgccggggccgaccgcctcaccatcaccgaccatcttgccgtgcaggatctgatg
gccatcggccgcaccgtcgccaacgccgaggacgagctatcgctggccgaagcgttgaaa
agcccgatcttcggtttcagcgacgacgatctgatggcgcttgccctgtcgcgcggcaaa
gggggccggccgcaatctctttatctggccctgcgcaagctggcgggcgggatcgatcct
gcccggctgcagcctttcggtgtcgatgcggaggcgctggccgggcgggcgcgaagcgcc
ttcgagcgcctggaaacgctgcgcgaccgcgcgggttataccggggtctacggcttctac
gcgcgccttctcgggcccgagggtggccgaaccgccctgtctgcccgcctcggccgcgac
accggcgaggttctggacgcatttctggaccttgccctcaccgccgagcaggatggacgc
gccgggctcgacgccttccttgccgatttggccgccaacccaccggtcgtgcgccgcgag
atgacgcccctgaagggcgaggtccgcatcatgaccgtccatgccgccaaggggttggaa
gctccggcggtttttctggtcgatcccggctccgagccgttcaccgccagccacgccgcc
cgcctgatcgagtgggagggcatgccggggcaaccgcccgaaagccagcccggctttctc
tggtgtcccgacaagtcatgccgcaacgcggagatcgacaggctggcggcgctggagcgc
gggcgcgccgaggacgagtatcgccgccttctctatgtcgggctgacgcgcgccgccgac
cgcctggtcgtctgcggctattccggcatccgggagccgagtgccgacagttgggccgcc
catgtaagggacagcctcggcgaagccgccgaggcgatctccgatccgtccggcgcggtc
gttgcctggcgcatcggcacgccgccgcagggccggatggccgaggcggtgcaggctgcg
ccggcacgtccggcggccatggacctgtcccccctgccgcccgaagagatcggcccacgc
cccttgacgccatcgacggcgggcagccagacgatcgaacgcttcgaagggccggcatgg
cgctcgcctgtcctggacgggccggccgacccggcctttgcgcttttgcgcggacagatg
gcccatcgcctgctgcaggttttgcccgaccttgccgaggaagcacgtgccgatgccgca
cgcagctacgtcgtgcgttgcgcgccggcctggccggccgcggaacgcgaaaagttgatc
gaagaggtggacgccgtgctgagggagccggcattcgccccgatcttcgcaccggccagc
cgcgccgaggtagcgattgccggaaccgtcgagctcgatggacgccgcctgccggtgaac
ggcctgattgacaggctggccgtggaagcggaccgcgtccttctggtggactacaagacc
aaccgccccgtcccgcaggatgccgccgccattccggaagcgcatcgccggcagatggcg
ctttatgcagccctgctggccccgctgtttccggaccggcgcatcgaggcggcactcttg
tacaccgaggggccggtgctgcaccggctggagccggaggcactgtcgcttcagcccgct
gcttga
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