Advenella alkanexedens: Q3V95_01005
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Entry
Q3V95_01005 CDS
T09248
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
aaln
Advenella alkanexedens
Brite
KEGG Orthology (KO) [BR:
aaln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aaln03009
]
Q3V95_01005
03016 Transfer RNA biogenesis [BR:
aaln03016
]
Q3V95_01005
Enzymes [BR:
aaln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Q3V95_01005
5.4.99.29 23S rRNA pseudouridine746 synthase
Q3V95_01005
Ribosome biogenesis [BR:
aaln03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Q3V95_01005
Transfer RNA biogenesis [BR:
aaln03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Q3V95_01005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
fvmRadSAM-pep
Motif
Other DBs
NCBI-ProteinID:
WKU19650
LinkDB
All DBs
Position
complement(216295..217227)
Genome browser
AA seq
310 aa
AA seq
DB search
MSQSFPLPVRDGIVPSRLYLPREQQWPDLFSFLLVKFPHMSPDILRERLARGDMVDATGV
PMRLDSPFIADSWLWYYREVPAEVNVPFEIAVLYQDECLVVADKPHFLASIPGGRYLQET
ALIRLRKQLNNFELSPIHRLDRDTAGLLLFCANKRHRGAYQTLFQTRDVYKTYEAIAPFK
TSLEFPLIRESHIRKSAQYFTMEEVAEAPNSRTRISLLAHNGKWGHYLLEPLTGKKHQLR
VHMNGLGIPICNDEFYPALLPAREEDHFDRPLQLLARSIGFTDPVTGQARFFESRRTLEM
LSDMTETLSR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatcttttcccttgcccgttcgcgatggtattgtacccagccgcctgtatttg
ccacgggagcagcaatggcccgatttgttcagttttctgctggtgaaatttccgcatatg
tctccggacatactgcgtgagcggctggcccgcggggatatggtggatgccaccggtgta
cccatgcggctggacagtccttttatcgcggacagctggttgtggtattaccgcgaggta
ccggccgaagtgaatgtcccttttgagatagcggtgctgtaccaggatgaatgtctggtg
gtggctgacaaaccccattttctggccagtatcccgggggggcgttatttgcaggaaacc
gccctgatccgtttacgcaaacagctcaataactttgagttgagcccgattcaccgtctt
gaccgggatacggcgggtttgctgcttttctgtgccaataaacgccatcggggtgcctac
cagaccttgttccagacacgtgatgtgtacaaaacctatgaggccatcgctcccttcaag
accagtctggaattccccctgatacgcgagagccatatccgtaaaagtgcgcagtatttc
accatggaagaagtggccgaggcgcccaacagtcgtacccgcatcagcctgttggcgcat
aacgggaaatggggccattatttgctggaaccgctgaccggtaaaaagcaccagctgcgg
gtgcatatgaatggtctgggcataccgatttgcaatgatgagttctatccggctttattg
cctgcccgtgaagaggaccactttgacagacctctgcaactattggcccgttcaattggt
tttaccgatccggtgaccggtcaggcgcggttttttgaaagccgcagaacgttggaaatg
ctgtctgatatgaccgaaaccttgtcgcgttaa
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