KEGG   Advenella alkanexedens: Q3V95_02160
Entry
Q3V95_02160       CDS       T09248                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
aaln  Advenella alkanexedens
Pathway
aaln03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aaln00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Q3V95_02160 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aaln03021]
    Q3V95_02160 (rpoA)
   03400 DNA repair and recombination proteins [BR:aaln03400]
    Q3V95_02160 (rpoA)
Enzymes [BR:aaln01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Q3V95_02160 (rpoA)
Transcription machinery [BR:aaln03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Q3V95_02160 (rpoA)
DNA repair and recombination proteins [BR:aaln03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Q3V95_02160 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 RAD51D_N
Other DBs
NCBI-ProteinID: WKU19864
LinkDB
Position
447641..448624
AA seq 327 aa
MSQAFLKPRSIDVIPVTDNHAKVVMEPFERGFGHTLGNALRRILLSSMTGYAPTEVQITG
VVHEYSTLPGVGEDVVDILLNLKGVVFKLHNREEVTVTLRKSGTGPVLASDIELPHDVEI
INPDHVIANLTENGKLEMQIKVEQGRGYVPGNVRALADDKAHTIGRIILDASYSPIRRVS
YAVESARVEQRTDLDKLILDIETDGVITPEEAVRQAARILMDQISVFAALEGATETYETP
VRGAPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLAARGLTLGMKLENWPPLGLERP
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtctcaggcttttcttaaaccacgttccattgacgtcatcccagttaccgataaccac
gctaaagttgtcatggagccgtttgagcgcggttttggccatactttgggcaatgccctg
cgccgtattctgctgtcttccatgaccggttacgcgcccaccgaagtgcaaattaccggt
gttgtacatgaatattcaaccctgcctggtgtcggtgaggacgtggttgacatcctgctt
aacctgaaaggtgtcgtattcaagctgcataaccgtgaagaagtaaccgtcactttgcgt
aaaagtggtacaggtcctgttctggccagcgacattgaacttcctcatgatgttgaaatc
atcaatcctgatcacgttattgccaaccttaccgaaaatggtaagctggaaatgcagatc
aaggtagagcagggccgtggctatgtgcctggtaatgtccgtgccctggcagacgataag
gcccataccattggccgtattattctggacgcgtcttacagtcccatccgtcgtgtcagc
tatgccgttgaaagcgcccgtgttgaacagcgtaccgaccttgacaaactgattctcgat
atcgaaacagacggtgtgattacacctgaagaggccgtgcgtcaggctgcccgtatcctg
atggaccagatttccgtgtttgccgctcttgaaggtgcaactgaaacttacgaaacaccg
gtacgtggtgcgccacaaattgaccctgtactgctgcgtcctgttgatgatcttgagcta
accgtacgttcggccaactgcctgaaagcggaaaacatttactacattggtgatctgatc
cagcgtaccgaaaatgaattgctgaaaacacctaacctgggtcgcaaatcactcaacgaa
attaaagaagtcctggccgcacgcggcctgacgctgggcatgaaacttgaaaactggcca
ccacttggcctggaacgcccataa

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