Advenella alkanexedens: Q3V95_03585
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Entry
Q3V95_03585 CDS
T09248
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aaln
Advenella alkanexedens
Brite
KEGG Orthology (KO) [BR:
aaln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaln03016
]
Q3V95_03585
Enzymes [BR:
aaln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Q3V95_03585
Transfer RNA biogenesis [BR:
aaln03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Q3V95_03585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
WKU20134
LinkDB
All DBs
Position
complement(762049..763971)
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AA seq
640 aa
AA seq
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MYVVFEDNGQFKAEKILSEADTSLQVESASGKRSKIKRNNTIFFFDNHNPLTLLEEAGKL
AEDIDLEFLWECAPQQEFQVEELARDYFGHEPGILEKTALLLRLHGAPVYFHRKGKGQYR
PAPPDILKAALAALEKKQKQAEQQAIWIEQIKQGIVPEAFKPVIHTFLAKPDKNTLEWKA
FNQALNETGETIEQLLLRLKVYPHPLAIHREKFLGLNFPKGTQFKDITLPAIPDLPLADV
EPYSVDDMFTTEIDDAFSVHQESGSVYRIGIHIAAPALMVERDSELDKLARDRMSTVYMP
GDKIPMQPESVINTFSLIAGKPTPAVSLYVRANIDTGEILSSETRLEQICVQENLRTNLI
DHLITVESLEDESLPIPYPFLFRPLWKLGQHLKSAREVIRGKPENNSRVEYTFVLDGPAD
DPNSIINLAPRRRDAPLDLIVAEFMLLANTQWAGFLNDNGLPGIFRSQQAGRTRMSTHPL
PHETIGVPHYAWCTSPLRRYVDLINQSQIIAAAQHGISARLVAPFKPKDADLFAIIGAFE
SQYTLWGEFQNRLERFWCLRWFEQQQVTRVEATVLRDNLVRFNNAPFVTEINGMPELERG
SIVEIELMGNNLLELTLDCQYIRHIEPEEPVTHATEANPS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtagtttttgaagacaacggtcaatttaaagccgaaaaaatcttgtctgaagcc
gacacctccctgcaggtggagtcggcgtccgggaaaagaagcaaaataaaacgcaacaac
acgattttcttcttcgacaaccataacccgctcaccctgctggaagaggctggaaaactg
gctgaagacattgatctggagtttctgtgggaatgtgctcctcaacaggaattccaggtg
gaagagctggcccgtgactacttcggccatgaacccggcatcctggaaaaaaccgccctg
ttgctgcgccttcatggtgccccggtctattttcatcgcaaaggcaagggccaataccgc
ccggcgccacccgatatactgaaagcggcactggctgctctcgaaaaaaaacagaaacag
gccgaacagcaagccatctggatcgaacagatcaagcagggtattgtgccggaagctttt
aaaccggtcattcataccttcctggccaaacccgacaaaaacacgcttgaatggaaagcc
tttaaccaggccctgaacgaaaccggagaaaccatcgagcagcttttactaagactcaag
gtttatccacatccgctggccatccatcgtgagaaattcctgggcctgaacttccccaaa
ggcacgcaattcaaggatattacgctgccggccatccccgatctgcctctggccgatgtt
gagccctattccgtcgacgatatgttcaccaccgagattgatgatgcattctcggtccac
caggaaagtggcagcgtgtatcgcattggcattcatattgccgcccccgccctgatggtt
gagcgcgattcggaactggacaagctggcccgtgaccggatgtccactgtttacatgccc
ggagacaagatcccgatgcagccggaatccgtcatcaacacgttctcactcattgcaggc
aaacccacgcctgccgtgtccctgtatgtcagggccaatatcgataccggagaaatactg
tcatcggaaacccggcttgaacagatttgcgtacaggaaaacctgcgcaccaacctgatc
gaccacctgattaccgtcgagtccctggaagacgaaagcctgcccattccctatccgttc
ctgttcagaccactctggaaactggggcagcacctgaaatcggcacgcgaagtgattcgt
ggcaaacccgaaaataactcccgggttgaatacacctttgtgctggatggcccggctgat
gaccccaactcaatcatcaacctggcaccccgccgccgcgatgcaccgctggacctgatt
gttgccgagttcatgctactggccaatacccaatgggccggtttcctgaacgataatggc
ctgcccggcattttcaggtcacagcaagccggtcgcacccgcatgtccacccatccgctt
ccccatgaaaccattggcgttcctcattatgcatggtgcacctcacccttaaggcgctac
gtcgacctgatcaaccagagccagattattgccgccgcacaacatggcatctcggcccgt
ctggtggcgcctttcaaacccaaagacgccgacctgttcgccattatcggggcctttgaa
tcgcaatacaccctgtggggagaattccaaaaccgtcttgagcgtttctggtgcctgcgc
tggtttgagcagcaacaagttacccgcgttgaagccacggtattgcgcgacaacctggtc
cgcttcaacaacgccccctttgtgaccgaaatcaatggcatgcccgaacttgaacgcggc
agcattgtggaaatcgaattaatgggcaacaaccttcttgaactaaccctggactgccag
tacatcagacacattgaacccgaagaacccgtcactcatgcaacagaggccaacccgtca
tga
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