Advenella alkanexedens: Q3V95_04970
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Entry
Q3V95_04970 CDS
T09248
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aaln
Advenella alkanexedens
Pathway
aaln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q3V95_04970 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaln03019
]
Q3V95_04970 (recQ)
03400 DNA repair and recombination proteins [BR:
aaln03400
]
Q3V95_04970 (recQ)
Enzymes [BR:
aaln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q3V95_04970 (recQ)
Messenger RNA biogenesis [BR:
aaln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q3V95_04970 (recQ)
DNA repair and recombination proteins [BR:
aaln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q3V95_04970 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WKU20380
LinkDB
All DBs
Position
1050807..1052630
Genome browser
AA seq
607 aa
AA seq
DB search
MSLSSASQVLQTVFGYESFRGEQQAIVEHLVSGGDALVLMPTGAGKSLCYQVPALVRQGC
AIVVSPLIALMKDQVDALKELGVQAAYLNSTLDWSEIRAVERDFLRGELDLLYIAPERLL
GERCLQLLSQGQISLFAIDEAHCVSQWGHDFRPEYMGLSILHERWPDVPRIALTATATTH
TRQEIIQRLALDNARQFIASFDRPNITYHIVEKHDVRRQLLQFIRQEHMGDSGIVYCLSR
NKTEDIAKFLNKEGIKALPYHAGLDVARRAEHQARFQQEDDLVMVATIAFGMGINKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLAATAWMAYGLQDVVQQRKMIEDSNGDEVFKRRSA
AQLDAMLGLCETAQCRRVRLLAYFDQHIEPCGNCDVCLNPPKMWDGTVAAQKILSAVYRL
FKERGQRFGAGHIIDILRGKKTDRVTQNQHDTLSVFGVGQDLSDSAWRSVLRQLLANHYL
ALDIEGYGTLALTEKSRAVLKGEEVLMLRQESERMASKSRNIMPKAKKPVISLPPEAEER
FLQLKKWRLAIAREHEVPAYVIFNDATLRQIALNNPETLEDLSFVSGVGAHKLEAYGEAI
IEFLDQM
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgtcactatcttcagccagccaggttttacaaacggtctttggctacgaatctttccgg
ggcgaacagcaggccattgtcgaacatcttgtttctggtggggatgcgcttgtcctgatg
cccaccggtgccggcaagtccttgtgttaccaggtgcctgccttggtcaggcaaggatgc
gctattgtggtgtctccgttgatcgccttaatgaaagaccaggtggatgccctcaaagag
ctgggtgtgcaggcggcttacctgaattccacccttgattggtcggaaatccgcgcggta
gagcgagacttcttgcggggtgagctggacctgctttatattgctcccgaacgcctgctg
ggtgaacgttgcctgcaattgttaagccaggggcaaatatccctgttcgcgattgatgaa
gcccattgtgtatcccaatgggggcatgacttccgccctgaatatatggggctgtccatt
ttgcacgagcgctggcccgatgtgccacgcattgccttaactgccaccgccaccactcat
acccgccaggaaatcatccagcgtctggcgctggataatgccaggcagtttattgccagt
tttgaccggcccaatattacttatcacattgttgaaaagcatgatgtccgtcgccagtta
ctgcagtttatccgtcaagagcatatgggtgactcgggtattgtgtattgcctgtcacgc
aataaaaccgaagatattgccaaattcctgaataaggaagggattaaggccttgccttat
catgccggcctggatgttgcccgccgggccgagcaccaggcccgttttcagcaggaggat
gatctggtcatggtggctaccattgcctttggcatgggtattaacaagcccgatgtccgt
tttgtggcgcacattgatctacccaagtcggtagagggctattatcaggaaaccggccgt
gccgggcgtgatggccttgcagccaccgcctggatggcctacggcctgcaagatgtggtg
cagcaaagaaaaatgattgaagattcaaatggtgatgaagtcttcaagcgtcgttcggcg
gcccagctggatgccatgttggggctttgtgagaccgcgcagtgcaggcgggttcgtttg
ctggcttattttgaccagcatatcgaaccttgcggtaattgtgatgtgtgccttaacccg
cccaaaatgtgggatggtacggtggctgcacaaaaaatcctgtcggcggtttatcgcctg
tttaaagaacgtggacagcgttttggagcaggtcacattattgatatcttgcggggcaag
aaaaccgaccgcgtgacgcaaaaccagcacgatacattaagtgtgttcggggtggggcag
gatttaagcgattcggcctggcgtagcgtgttgcgacagttgctggccaaccattatctg
gcactggatatcgaaggctatggcaccctggcattaacggaaaaaagccgggcggtgctc
aagggtgaagaggtgctgatgctacgtcaggagtccgagcgcatggcatccaagtcacgc
aacattatgcccaaagccaaaaagccggttatcagtcttccgcccgaagccgaggagcgt
tttttgcagcttaaaaaatggcggcttgcgatcgcccgggaacatgaggtgccagcctat
gtgattttcaatgatgccaccttgcggcagattgccctgaataacccggaaacgcttgaa
gatttaagttttgtcagcggggtgggggcgcataagttagaggcttacggcgaagcgatt
attgaatttcttgatcaaatgtag
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