Advenella alkanexedens: Q3V95_06200
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Entry
Q3V95_06200 CDS
T09248
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aaln
Advenella alkanexedens
Brite
KEGG Orthology (KO) [BR:
aaln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aaln03016
]
Q3V95_06200 (truB)
Enzymes [BR:
aaln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Q3V95_06200 (truB)
Transfer RNA biogenesis [BR:
aaln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Q3V95_06200 (truB)
Prokaryotic type
Q3V95_06200 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
HTH_58
Motif
Other DBs
NCBI-ProteinID:
WKU20791
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All DBs
Position
1312438..1313190
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AA seq
250 aa
AA seq
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MGRRKGLDITGVLLLDKPVDLSSNHALQRARRAMDAKKAGHTGTLDPFATGLLVCCFGKA
TKICGPMLNVDKKYIATLQLGSETDSGDLTGTVTQEAADFTGITAERLNNVLPRFLGEIQ
QIPPMYSALKRDGRPLYEYARQGIELEREPRTVTIYEINVLRVQPEMVELEVSCSKGTYI
RTLAQDIGRALGCFAHLIALRRTAVGPFTIDDAIDLASLQSMESPVDTLRALDELPDGLV
PLKLLQKEIL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgggacgaaggaaaggtctggacattaccggggtgctactgcttgataaaccggtagat
ttatcaagcaaccacgccctgcaaagagccagacgtgctatggatgcaaaaaaagccggt
catacaggaactttggatccttttgcgaccggcttgttagtctgctgttttgggaaagcg
actaaaatatgtggtcccatgctgaatgtggataaaaaatatattgccacgcttcagttg
ggttcggaaaccgattcaggcgacctgacggggactgttactcaggaggctgcggatttt
accggtattaccgcagaacggttaaacaatgtattgccccgttttttgggtgaaatacag
caaattccgccgatgtattcggccttgaagcgggatgggcgtccgctttatgaatatgcg
cgtcaaggaatagagcttgagcgtgaacctcgtacagtaaccatctacgaaataaatgtg
ctgcgtgttcaacctgagatggtcgagttggaagtgtcttgcagtaaaggcacttatata
cgcacacttgcccaggatattggaagggcattgggttgctttgcgcaccttattgccttg
cggcgaacggcggttggcccgtttaccatagatgatgcaattgacctggcctcattgcag
agtatggaatcaccggttgacacgctgagagccctggatgaactaccagacggcctggtg
ccgttaaaactacttcaaaaggaaatactatga
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