Advenella alkanexedens: Q3V95_06480
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Entry
Q3V95_06480 CDS
T09248
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aaln
Advenella alkanexedens
Pathway
aaln03030
DNA replication
aaln03410
Base excision repair
aaln03420
Nucleotide excision repair
aaln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q3V95_06480 (polA)
03410 Base excision repair
Q3V95_06480 (polA)
03420 Nucleotide excision repair
Q3V95_06480 (polA)
03440 Homologous recombination
Q3V95_06480 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaln03032
]
Q3V95_06480 (polA)
03400 DNA repair and recombination proteins [BR:
aaln03400
]
Q3V95_06480 (polA)
Enzymes [BR:
aaln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q3V95_06480 (polA)
DNA replication proteins [BR:
aaln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Q3V95_06480 (polA)
DNA repair and recombination proteins [BR:
aaln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Q3V95_06480 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q3V95_06480 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
WD40_4
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WKU20647
LinkDB
All DBs
Position
1369089..1371809
Genome browser
AA seq
906 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFHAMPDLRNALGEPTGAIYGVINMMRKINQDYQADYVACIFDA
KGKTFRDDLYPDYKGHRPPMPDDLALQIAPIHKAISAMGWPVIAKPGVEADDIIATLAEI
ATQNDVKTIISTGDKDIAQLVNGHVSIVNTMTNETLDVEGVKSKFGVLPEQIIDYLMLIG
DSVDNVPGVPKVGPKTAVKWLNEYGSLDNLVENADKIKGVVGNNLRENIPNFALTRQLIT
IKRDCEIDDFFSDMSDLVRKPQDPEILREIFDHFGFRTWLRELTGDAQAVPQQDARVAHD
IPEAPETVDYVTVDTPELLEDCLAQIQAASLVALDTETTSLDPMVASLVGTSMSIHPGQG
WYIPLAHKGNMLAQQLDKAMVLEKLRPWLEDDNAAKVLQNAKYDTHVFANEGIALKGIQD
DTMLMAYVLESHRSVGMQDLAQRYLGRKGVDYTDLCGKGARQIGFDEVEIEKASFYACED
TDFTLQLVGLMRPLVVAEEGLDRIYRLEMWVSEVLAKIERNGVKIDEKALQQQSHEIGLK
LLELENKAYELAGQPFNLNSPKQLAEILFERMQLPVIRKTPKGAPSTDEEVLTKLAQDYP
LPATLLEYRGLAKLKSTYTDKLPKMINPKTGRVHTNYAQAAVITGRLASSDPNLQNIPVR
TEEGRRVRTAFVPEKGGVIMSADYSQIELRVMAHVSDDANLQLAFAQGKDIHRATASEVF
GTPLDEVTAEQRRAAKAINFGLIYGMGAFGLASNLGITRDAAQSYIDRYFERYPGVATYM
DLTRAKANEQGYVETVFGRRLWLPEIKGAKGPRKAAAERAAINAPMQGTAADLIKMAMVA
VQEWIEKENLKTMIIMQVHDELVLEVPQDEVDLVKSRLPELMCGVAELKVPLVAEVGMGP
NWEQAH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttattacttgttgatggatctagctatttgtaccgggctttccatgca
atgcctgatttaagaaatgcattgggtgagccaaccggtgccatttatggtgtcatcaat
atgatgcgcaaaatcaaccaggattaccaggctgattatgttgcctgcatttttgatgca
aaaggcaaaacatttcgtgatgatttatatcctgactacaaagggcaccgacctcccatg
cctgacgatttggctttgcaaatagcgcccattcacaaggccatcagcgccatggggtgg
cctgtcattgcaaagcccggggtcgaggcggatgacattattgccactttagcagaaatt
gcgacacaaaatgatgtcaagaccattatttcaacaggggataaggatatcgcccagctg
gttaatgggcatgtcagtattgttaatacaatgaccaatgaaacgctggatgtggaaggg
gtgaaaagcaagtttggcgtgttgcctgagcagattattgattatctgatgctgattggc
gattcggtggataacgtgcctggtgtgcctaaagtggggccgaaaaccgctgtcaagtgg
ttgaacgaatatggctctcttgataacctggttgaaaatgccgataaaatcaaaggagtt
gttggcaataacctgcgtgaaaatatccccaattttgcgcttacccgtcagctgattacc
atcaagcgcgactgcgaaattgatgatttcttttcagacatgtctgatctggtgcgcaag
ccacaggatccggaaatactcagggaaattttcgatcatttcggtttccggacctggttg
cgcgagttgaccggtgatgcccaggcagtgccacaacaggatgccagggttgcccatgat
attcccgaggcaccggaaaccgtcgattacgtgacggtggatacgcccgaattgctggaa
gattgtctggcacagatccaggccgcttcgttggtggcgctggataccgaaaccacttcg
ctggacccgatggtggcatcgctggtggggacttccatgtccattcatccagggcagggg
tggtatattccgctggcccataaagggaatatgttggcccagcaactggataaagccatg
gtgcttgaaaaactgcggccatggctggaagacgacaatgcggccaaggtgctgcaaaac
gccaaatatgacacgcatgtatttgccaatgaaggtattgcgttaaaagggatacaagat
gacaccatgctgatggcatatgtgctcgaatcccatcgcagtgttggcatgcaagacctg
gcgcagcgttatctggggcgcaaaggggtggattacacggatttatgtggcaagggtgcc
cgtcagatcggttttgatgaggttgaaattgaaaaagcctctttttacgcctgcgaagat
accgatttcaccttgcagttggttggtctgatgcgtcctttggtggtggctgaagaagga
cttgaccggatttaccggcttgagatgtgggtttctgaagtgttggccaaaatcgagcgt
aatggtgtcaagattgatgaaaaagccttgcagcagcaaagccatgaaattggtttgaag
ctgttggagttggaaaataaagcatacgaattggcgggtcagccgtttaatctgaactcg
cccaagcagctggccgaaattttatttgaacgcatgcaattgccggttatccgcaaaacg
cccaagggggcaccctcaaccgacgaagaagtgttaaccaagctggcccaggattacccg
ttgccggccactttgctggagtaccgtgggctggccaagcttaaatccacctataccgac
aaattacccaaaatgatcaaccccaaaaccggccgggtgcataccaattatgcgcaggcc
gcggtcattacaggtcgtctggcttcttccgatcccaacttgcagaatattccggtgcgt
actgaggaagggcgccgggtcagaaccgcttttgtgcccgaaaaagggggcgtcattatg
tcggctgactactcacaaattgagttgcgagtgatggcgcatgtgtcggatgatgccaac
ctgcaattggcgttcgcccaaggcaaggatattcaccgggcaactgcatccgaagtgttt
ggtacgccactggacgaagtaaccgctgagcagcgtcgtgctgccaaggccattaacttt
ggtctgatttacggtatgggggcatttggattggccagcaacctgggtattactcgtgat
gcggcgcaatcttacattgaccgttattttgaacgctatcccggtgtggctacttacatg
gaccttacccgggccaaggccaatgagcaggggtatgtggaaaccgttttcgggcggcgt
ctgtggttgcctgaaatcaagggggccaaagggccacgtaaagcagcggcagaaagggcg
gccattaacgcgcccatgcagggcacggcggctgacctgattaaaatggccatggtggcc
gtgcaggaatggatagaaaaggaaaacctgaaaaccatgatcatcatgcaggtgcatgat
gaattggtgctggaagtgccgcaagatgaagtggatttggtcaagtccaggttgcctgaa
cttatgtgtggcgtggcggagctgaaggtgccgttggtggctgaagtggggatgggtccc
aattgggagcaggcccattaa
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