Advenella alkanexedens: Q3V95_06985
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Entry
Q3V95_06985 CDS
T09248
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aaln
Advenella alkanexedens
Brite
KEGG Orthology (KO) [BR:
aaln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaln03400
]
Q3V95_06985
DNA repair and recombination proteins [BR:
aaln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q3V95_06985
Archaeal homologous recombinant proteins
Q3V95_06985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
cobW
Snapin_Pallidin
nSTAND3
ABC_ATPase
AAA_21
ABC_tran
Scaffolding_pro
Motif
Other DBs
NCBI-ProteinID:
WKU20739
LinkDB
All DBs
Position
1477566..1480622
Genome browser
AA seq
1018 aa
AA seq
DB search
MKPVYLSMQAFGPFAAKEEVDFTRLGENPLFLINGPTGAGKSTLLDAICFALYGQAADDD
RDPAALRSDMAASHSLTEVEFLFALGEKQYRIFRMPAQDRPKQRGEGFTMQATEAKLWEI
QADGNEILLIPKKATEVTERVVELTGLTAEQFRQVMVLPQGKFRELLLANSQQRESIFSQ
LFQTSIYRKIEEKLKQRAADIEESKKKHDQKIAGLLESADCSSEAALKEKTSQLAPLVEE
LETKKNLAFEQFMLFEKERSAAMALQELFRQKESCLHSLATLEQSRGQLRQTEHKLARSS
QATLLMPLIQAREEAEKYSESLQQALQALALQMVGAGKKLEQTRQQFELATSQYRQKDDL
NVQIHELERYREKMRLLQEKQVENERLQAVWRQINQTHDEQLLARQHKQQQLEQAREKIV
ELRVFVEALPEAVQQLDQAEHVLQLKKQYDALLDKSQALQARAMAGIASVEETRQSWQAL
HEEDTRLQIQWHQEQAAQLASRLQLNEPCPVCGSTMHPQPAQAQQALLEKADLEQSAQRL
EKARQQLQNMENTLAQVRTLQEALAGQINEQLAALGDSASVPAPTLLDVCEQARKRVKQC
TQARQSQSLLQEQLAVFEKALSQLDETLQQTREKQQTIRLSLASLENELKLRLAELPESF
RDANVLAQTLLDVRQRLALLQKEYEMSRQAFELASQEHVQLQERKAGLESRQEQAIVALQ
QARQTCQDQLGQHAFDSEQACRLAVLSAHERQALEQYVAQFNRQQYELEGQCKNICAQLE
GKTPPDLTQMETRHEQMKQLRDQAQSAWQQHNETLNQLKSVAAKIDRMHEQNAGLEREYA
IYGTLSHVANGRADSRISLQRFVLSVLLDDVLADATVRLRLMSKGRYQLIRKEDRAKGNS
RSGLDLEVMDEYTGIARPVATLSGGESFMAALSLALGLSDVVQAYAGGIRLDTLFIDEGF
GSLDMDSLDLAIRTLLDLQASGRTIGIISHVTELKEQMALRIDVLPSARGSRIQVHGV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgtttatttgagcatgcaggctttcggtccttttgcggcaaaagaagaagtt
gattttacccgcctgggcgaaaaccccctgttcctgattaatgggccaaccggtgccggt
aaaagtactttgctggatgccatctgttttgccctgtatggtcaggcggccgatgatgat
cgggatccggctgccctgcgctcggatatggcggcttctcattccttaaccgaagttgag
ttcttgtttgctttgggtgaaaagcaataccggattttcaggatgccggcccaggacagg
cccaagcagcggggtgaaggttttaccatgcaggcgaccgaggccaaattgtgggaaata
caggcggatggcaatgagattttgctgattcccaaaaaggccaccgaggtaacggaaagg
gtggttgagctgacaggcctgacagctgagcagttcaggcaggtgatggtattgccacag
ggtaagttcagggagttgttattggccaactcccaacaaagagaaagtattttcagtcag
ctgttccaaacctccatttaccgtaaaatagaagaaaaactcaagcagcgggctgcggat
atcgaagaaagtaaaaaaaaacatgaccagaaaattgccggtttgctggagtcggccgat
tgcagctcggaagcggccctgaaagaaaaaaccagtcaacttgcgccactggttgaggaa
cttgaaacgaaaaaaaacctcgcctttgaacaattcatgttgtttgaaaaagagcgttcc
gctgcaatggctttgcaggaattgttcaggcagaaagaaagttgcctgcattcgctggcc
acacttgagcaatcacgcgggcaattgcggcaaaccgaacataagcttgcgcgctccagc
caggccactttgttgatgccattgatccaggcacgtgaagaagcggaaaaatatagcgaa
agtctgcagcaggcattgcaggcgctggcgctgcaaatggttggtgccgggaaaaagctt
gagcaaacccgccagcaatttgagctggccacaagccagtaccggcaaaaagatgatttg
aatgttcaaatccatgaacttgagcgttatcgtgaaaaaatgcgcctgcttcaggaaaag
caagtggaaaatgagcgcctgcaggcagtatggcgtcaaattaaccagacgcatgatgag
cagttgcttgcccggcaacataaacagcaacaactggagcaggccagggaaaaaattgtc
gagttgcgggtttttgttgaggcgctgcctgaagctgtgcagcaactggatcaggcggaa
catgttctgcaattaaaaaaacagtacgatgcgctgctggataaaagtcaggccttgcaa
gcgcgggcgatggcgggcatcgcctctgtggaggaaacgcggcaaagctggcaggccctg
cacgaagaagatacccggctgcaaattcagtggcaccaggagcaggcggcacaattggcc
agtcgtttgcagttgaatgaaccttgcccggtttgtggcagcaccatgcatccgcaaccg
gcacaggcacaacaggccttgctggagaaggcagatctagaacagtctgcacaaagactt
gaaaaagcacgtcagcagctgcaaaacatggaaaacaccctggctcaggttcgtaccttg
caagaggcattggcggggcaaattaatgagcagctggcagcgctgggtgacagtgccagc
gtacccgctcccactttgctggacgtgtgtgagcaggcccgcaaacgggttaagcaatgc
acccaggccagacagtcgcagtctttgttgcaagagcagctggctgtatttgaaaaggcg
ctgtcgcagctggacgaaaccttgcagcagacccgggaaaagcagcagaccatcaggctt
tccctggcttccctggagaatgagctcaagcttcggctggccgaattgcccgagtcgttt
cgtgatgccaacgtactggcgcaaacattgctcgatgtcaggcaacgtctggctttgctg
caaaaagaatatgaaatgtcccggcaggcatttgagttggccagccaggaacatgttcag
ttgcaggaacgcaaggctggcctggaaagccggcaggagcaggcaatcgttgccctgcaa
caggcgcggcagacctgccaggatcagcttgggcagcatgcttttgatagtgaacaggca
tgcaggctggcggtgctgagtgcgcatgaaaggcaagcgcttgagcagtatgtggcgcaa
tttaaccgtcaacagtatgagcttgaagggcagtgtaagaatatttgtgctcagcttgag
ggtaaaaccccgcctgatttgacgcaaatggaaaccaggcatgaacagatgaagcaattg
cgtgaccaggcccaatctgcctggcagcagcataacgagacattgaatcaattgaaatcg
gtggcggcaaaaattgaccgcatgcatgagcaaaatgccgggcttgaacgggagtatgcc
atttatggcacgctcagccatgttgccaatgggcgcgcagacagccggatcagtctgcag
cggtttgtgttaagtgttttgctggatgatgtgctggccgatgctacggtgcgcctgcgt
ttgatgagcaaggggcgttatcaattgatccggaaagaggaccgtgccaagggcaatagc
cgctcggggctggacctggaagtcatggatgaatacacgggcattgcccggccggtagcc
accttgtcggggggcgaatcgttcatggcggcgctgtcgctggcgctgggcttgtcggat
gtggttcaggcctatgccggtggcatcaggttggataccctgtttattgatgaaggattt
ggcagcctggatatggattctttggatttggccattcgtaccttgctggatttgcaggcc
agcggccgtactatcgggattatttcccatgtgaccgagttgaaagagcaaatggcgctg
cgtattgatgtgctgccctcggcacggggcagccgtattcaggttcatggcgtttga
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