Advenella alkanexedens: Q3V95_08565
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Entry
Q3V95_08565 CDS
T09248
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aaln
Advenella alkanexedens
Pathway
aaln03030
DNA replication
aaln03430
Mismatch repair
aaln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q3V95_08565 (holB)
03430 Mismatch repair
Q3V95_08565 (holB)
03440 Homologous recombination
Q3V95_08565 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaln03032
]
Q3V95_08565 (holB)
03400 DNA repair and recombination proteins [BR:
aaln03400
]
Q3V95_08565 (holB)
Enzymes [BR:
aaln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q3V95_08565 (holB)
DNA replication proteins [BR:
aaln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q3V95_08565 (holB)
DNA repair and recombination proteins [BR:
aaln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q3V95_08565 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
WKU18372
LinkDB
All DBs
Position
complement(1805761..1806804)
Genome browser
AA seq
347 aa
AA seq
DB search
MHLPEFLPWQTDIARQWLGNKERFSHAWIIHGIPGIGKLKFAHAAATGLLCESSHNGIAC
GHCESCGWVKSGNHPDLRIVLPDAIAVKEGFVTTPENDEESGAKKTLSQDIRIEQVRQLE
KLFNVSTHRGGYRVIVLYPAESLNAASSNALLKVLEEPPENTIFLLVTHAIQRLLPTLLS
RCRRLALPIPERSVALSWLQKNGVTDGEVWLASTGGAPLSALAFSQSDYEPVKYWLSAFA
DKLAHREMPNLDKLAELLEKIPATQWLDSLQRFVFDINLNRHGQASRYFPTLGKNVSGIA
GNMAADKIAQLFKWLAEQQRIADHPLNARLFIISTLQRVALSCISKS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcatctacctgagtttttaccatggcaaacggatattgcccgtcaatggctgggcaat
aaggaacggttttcacacgcctggattattcatggcattcctggcataggcaaactgaaa
tttgcccatgcggcggcaaccggcttgttgtgcgaatcctcccataacggcatcgcatgt
ggacactgtgaatcctgtggctgggtcaagtcaggaaatcaccccgatttgcggatagta
ttgcccgatgccattgccgttaaggaaggttttgttaccaccccggaaaacgatgaggaa
agtggtgcaaagaaaaccctgtcccaggacatcaggatagaacaggtacgtcagcttgaa
aaactgtttaatgtttccacgcatcggggcggttaccgtgtcattgttctgtacccggca
gaaagcctgaatgcagcttcttccaatgccttgctaaaagtgcttgaggagccaccagaa
aataccatttttcttttggttacgcatgctatccagcgattgctgcctactttgctgtca
cgatgtcgtcgtctggccttgcccataccggaacgctcggtggccctgtcctggctacag
aaaaacggggtgaccgatggtgaggtttggttggcttccaccggtggcgcgccgttaagc
gctttggccttcagtcagtctgattatgagcccgttaaatactggctctcggcgttcgct
gacaaactggcgcaccgggaaatgcccaaccttgataaattggcggaattgctggaaaaa
atcccggcaacgcaatggctggacagccttcaacggtttgtttttgatatcaatcttaat
cgccatgggcaagcctcccgttattttcccaccttgggtaaaaatgtttctggtatcgca
ggcaatatggctgcggataaaattgcccagctctttaaatggctggcagagcagcaacgt
attgccgaccatccgcttaatgcccgtttgtttatcatctctaccttgcaacgggttgca
ttaagctgtatttcaaagtcgtaa
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