Advenella alkanexedens: Q3V95_12410
Help
Entry
Q3V95_12410 CDS
T09248
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aaln
Advenella alkanexedens
Pathway
aaln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q3V95_12410 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaln03019
]
Q3V95_12410 (pcnB)
Enzymes [BR:
aaln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Q3V95_12410 (pcnB)
Messenger RNA biogenesis [BR:
aaln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Q3V95_12410 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
REV
DUF2204
Motif
Other DBs
NCBI-ProteinID:
WKU19083
LinkDB
All DBs
Position
2608691..2610079
Genome browser
AA seq
462 aa
AA seq
DB search
MIKSTIKSFVSRLFNSPASDTKKTKARIYHQEQHGIDRRLVSRNAIKVCEVLNQKGFQAF
IVGGAVRDLILGLEPKDFDVATNATPEEVRASFRRARIIGRRFQLVHVVFGPEIIETSTF
RANSNGQSKTDEHGRILNDNVFGTQEEDAARRDFTLNALYYDPLTEQVIDYHNGLSDLRK
HIVRIIGDPETRYREDPVRMLRAVRFAAKLNGTIEPHTKEPIKRLADLISNVPDSRLFDE
TLKLMTCGNALACLKQLREEGLHEGTLPLLDVVLKQPGGQKFVELTLDRTDHRVRQGKSV
SPSFLYAALLWRLVDVYWKRNIAQKEPPMQALIHAADQVLEDQVHKLAIQRRHTTDMREI
WFMQPRFEHPVPRQIWKMTEQPRFRAACDFLQLRAASGEFDSVQAQWWMDLADTDAAGKT
RMIEELTQKLKGTPGSAGTARKRRKRRSPARKKAALPQQDIS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaagcaccattaaaagcttcgtcagccgcctgttcaattccccggccagcgac
acaaaaaaaaccaaagcccggatttaccaccaggagcaacacggcattgatcgccggctt
gtctcgcgcaacgccatcaaggtctgcgaggtattaaaccagaaagggttccaggccttt
atcgtaggaggtgccgtgcgcgatcttatcctgggcctggagcccaaggattttgatgtg
gccaccaatgccacccccgaagaggtccgtgcctctttccggcgagcccgcattattggc
cggcgctttcaattggtgcacgtggtttttggccccgaaatcattgaaacctcaactttc
agggccaatagcaatggccagagcaaaaccgatgaacacggccgcatcctcaacgacaac
gtcttcggcacccaggaagaagatgccgcccgacgcgatttcacccttaacgccctgtat
tacgacccgcttaccgagcaggtgatcgactaccataatggcctgtcagatcttcgcaag
cacatcgtacgcattattggcgaccctgaaacccgttaccgcgaagatccggtccgcatg
ttgcgggcggtacgctttgccgccaaactgaatggcactatcgagccccacaccaaggaa
cccatcaaacgactggccgatctcatttccaatgtgcccgactcgcgcctgtttgatgaa
acccttaaactcatgacctgcggcaatgccctggcctgtctgaaacagcttcgcgaagaa
ggcctgcacgaaggaaccctgcccctgctggatgtggtcctgaagcagccaggtggccag
aaatttgtcgaactgactcttgaccgcaccgatcaccgggtccgtcagggcaagtcggtc
agccccagtttcctttatgccgcgctgttatggcgcctggtggatgtgtactggaaacgt
aatattgcgcaaaaagaaccgcccatgcaggcactgattcatgcggcagaccaggtgctt
gaagaccaggttcacaaactggccatccagcggcgtcacaccaccgatatgcgtgaaatc
tggttcatgcagccccgctttgaacatcccgttccacgccagatctggaaaatgaccgag
cagccccgttttcgggccgcctgtgattttctgcaattgcgtgcagccagcggtgaattc
gatagcgttcaggctcaatggtggatggatctggcagataccgatgcggctggcaaaacc
cggatgattgaagaactgacgcaaaaactgaaaggcacccccggttcggcgggtaccgca
cgcaaacgtcgcaagcgtcgttcgcctgcccgcaagaaagccgctttgccacagcaggac
atttcatga
DBGET
integrated database retrieval system
