Advenella alkanexedens: Q3V95_14285
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Entry
Q3V95_14285 CDS
T09248
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
aaln
Advenella alkanexedens
Brite
KEGG Orthology (KO) [BR:
aaln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaln03021
]
Q3V95_14285 (rpoH)
Transcription machinery [BR:
aaln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q3V95_14285 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_PafC
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WKU19429
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All DBs
Position
2995172..2996050
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AA seq
292 aa
AA seq
DB search
MSNQALALSNPNVAMAISNPGALGTIEAYISAVNRLPLLSAEQEKNLAEQLQKEGNLDAA
RDLIMSHLRLVVSISRQYLGYGLPHADLIQEGNIGLMKAVKRFDVSRGVRLVSFAVHWIK
AEIHEYIIRNWRMVKIATTKAQRKLFFNLRSMRPDGQTLDPEHIEGIAAKLNVRPEDVSE
MEVRLSGRDMSFESQTDDEDEFAPISYLSDEGDHEPTTVIEKNAYDTLQSSGITQALSLL
DDRARRIIEARWLQDEGGATLHELADEFGVSAERIRQIEAAALKKMRKALSD
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcaagcgcttgcactgtcaaatcccaatgtagcgatggccatctccaatcct
ggggcattaggcaccatagaggcatacattagtgcagtaaaccgtttacctcttctgtcc
gcagaacaggaaaagaatttggctgagcagctgcaaaaagaaggcaacctggatgcagcg
cgtgacctgatcatgtcgcatcttcgtctggtggtgtctatttcccgccagtatctgggc
tatggcctgccccatgccgaccttatacaagagggtaatatcggcctgatgaaagcagtc
aagcgttttgatgtttcccgtggcgtgcgcctggtttcctttgccgttcattggatcaag
gcagaaatccatgaatacatcattcgcaactggcgcatggtaaaaattgccaccaccaaa
gcccaacgcaagctgtttttcaatttgcgcagcatgcgtcccgatggccaaacccttgac
ccggagcacattgaaggtattgctgccaagctgaatgtccgcccagaggatgtgagcgaa
atggaagtccgcctttcgggccgcgatatgtcttttgaatcacaaaccgatgatgaggac
gagttcgctcccatttcttacctgtcagacgagggcgatcacgaacccaccactgtgatt
gaaaaaaatgcctacgataccctgcaaagctcagggattacccaggcactttcactgctt
gatgaccgtgcccgccgtattattgaggcccgctggctacaagatgagggcggtgccact
ttacatgaactggctgacgaatttggagtatcggccgagcgaatccggcaaatcgaggcg
gcagccctgaaaaaaatgcgcaaggcattaagcgattaa
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