Alternaria alternata: CC77DRAFT_1006560
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Entry
CC77DRAFT_1006560 CDS
T05291
Name
(RefSeq) HIT-like protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
aalt
Alternaria alternata
Pathway
aalt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CC77DRAFT_1006560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalt03400
]
CC77DRAFT_1006560
Enzymes [BR:
aalt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
CC77DRAFT_1006560
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
CC77DRAFT_1006560
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
CC77DRAFT_1006560
DNA repair and recombination proteins [BR:
aalt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
CC77DRAFT_1006560
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
CC77DRAFT_1006560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
Motif
Other DBs
NCBI-GeneID:
29109017
NCBI-ProteinID:
XP_018388575
JGI:
1006560
UniProt:
A0A177DTR6
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MTNQAAAKHTHDAMTKEEIAGAETPNQPQPAVAPGSSKRPNAFTELMSQTKKPKPPTIPA
ADGPGLVEKATKTVKRWDPRNGLGVYIESPETNPENKVLEYDEDFVVITDKYPKASVHLL
LIPRKPKYYDQHPLHALSTDAAFLAEVEKRVIRLKDLAAYELRRQYGDVSTTDKPYNEAL
EEMMCSRNPPPVEEQASLLPPGRDWSKDIVVGVHTHPSMNHLHIHIFSRDMHSDWMKHKK
HYLSFNSSFLVRLDEFPLEEGSERFAPGDWPSWDMKCWRCSKNFKNKFTALKQHLNEEFE
DWKRE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccaggctgccgcgaagcatacccacgatgcaatgacaaaggaagagatagca
ggcgctgagacgccgaatcaacctcaacctgcagtcgctcccggctcgtcgaagcgcccc
aatgcatttacagaacttatgtcacagacgaaaaaaccaaagccacctaccatacccgcc
gcagacggcccaggccttgtagagaaggctacgaagacagtcaagcgctgggacccgcgg
aatggattgggcgtatacatcgagagtcccgagaccaacccggagaacaaagtactagag
tacgacgaggactttgtcgtgataacagacaagtacccaaaagcgagtgtacacctccta
ctcattccacgaaaacccaaatattacgatcaacatcctctccacgcgctgtccacagac
gccgccttccttgccgaagtagagaaacgcgtcatccgactcaaggatctcgctgcctac
gaactccgacgtcagtatggcgacgttagcaccacggacaaaccctacaacgaggctctg
gaagaaatgatgtgctctcgcaacccaccaccagtggaagaacaagcttccctcctccca
cccggtcgggactggtcaaaagacatcgtcgtaggcgtgcacacccatccctcgatgaat
cacctgcacattcatatcttcagtcgagacatgcattcagactggatgaaacataagaag
cactacttgagcttcaattctagtttccttgttcgattagacgagtttccactagaggaa
ggaagcgagaggtttgcacctggtgactggcccagctgggatatgaagtgctggcgatgt
tctaagaacttcaagaacaagtttacagcgctgaaacaacacctgaatgaggagtttgag
gactggaagagggaatga
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