KEGG   Alternaria alternata: CC77DRAFT_1012758
Entry
CC77DRAFT_1012758 CDS       T05291                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
aalt  Alternaria alternata
Pathway
aalt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC77DRAFT_1012758
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aalt03041]
    CC77DRAFT_1012758
   03036 Chromosome and associated proteins [BR:aalt03036]
    CC77DRAFT_1012758
Spliceosome [BR:aalt03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CC77DRAFT_1012758
 Complex B
    CC77DRAFT_1012758
 Complex C
   U2 SnRNP specific factors
    CC77DRAFT_1012758
Chromosome and associated proteins [BR:aalt03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    CC77DRAFT_1012758
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_2 HEAT_EF3_N Htt_N-HEAT_1 Cnd1 Vac14_Fab1_bd XMAP215_CLASP_TOG mTOR_dom UNC45-central HEAT_Maestro
Other DBs
NCBI-GeneID: 29109383
NCBI-ProteinID: XP_018381512
JGI: 1012758
UniProt: A0A177D9Y6
LinkDB
Position
Unknown
AA seq 1242 aa
MAGPRAGNSRANGAANGDTSNNKQSLNEPLDKELYGGNNGDYVSSIAVADDDNDMEDVQL
NGRSLVGQYTASKEMMNEFAHGDAGEADILDSREKQAQIASRETDYQRRRFDRALSPSRA
DPFAKDGEDGGQSYKDVMKQREFEREEARVKKLIEEKERTGGNEVLDHKPTLKDDESTPV
DGDKTPPMKKTRKRRRWDEAGDAETPAIKEEADGVKVESEPKKRSRWSPAPEDDKVEAAQ
PTRSRWDTTAVAPASTATPAPAANGARPVAQTFAFGTDISNRNAPLSDEQLDMMLPGEAE
GYKVLEAPPGYEPVRRPVGMPALPTGYQGFLIPEADNSLAAMGKQLPTEIPGVGDLQFFK
NEDMKYFGKLTDGADENEMTVEELKERKIMRLLLKVKNGTPPMRKTALRQLTDNARQFGA
GALFNQILPLLMERTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDQDYY
ARVEGREIISNLAKAAGLAHMISTMRPDLDHQDEYVRNTTARAFAVVASALGIPALLPFL
RAVCRSKKSWHARHTGVKIVQQIPILMGCAILPHLKGLVECIGENLNDEQPKVRMVTALA
LAALAEAASPYGIESFDDILNPLWTGARRQRGKALASFLKAVGYVIPLMDEEYSNYYTSQ
IMEIVIREFQSPDEEMKKVVLKVVSQCSNTAGVTPVYLKDNVLPEFFKHFWVRRMALDKR
NYRQVVDTTVDLAQKAGVAEIVGRIVNNMKDENEAYRKMTVETVDKVISTLGAHDVDQRL
EEQLIDGVLVAFQDQTIEDPIVIDGFATVVNALGERTKTYLPQIVATVLARLNNKSATVR
QQAADLISRITFVMQKCDEDPQLIKLAQALYEYLGEEYPEVLGSILGALRAIVTVVGLHA
MQPPIKDLLPRLTPILRNRHEKVQENTIDLVGRIADRGANYVNPREWMRICFELLDMLKA
HKKGIRRAANNTFGYIAKAIGPQDVLATLLGNLRVQERQSRVCTAVAIGIVAETCAPFTV
LPALMNEYRVPELNVQNGVLKSLSFMFEYIGEMAKDYVYAITPLLEDALIDRDQVHRQTA
ASVVKHVALGCVGLDCEDAMIHLLNLLWPNLFETSPHVIDRIIEAIEGVRNAIGTPLVMN
YVWAGLFHPARKVRQPYWRIYNDAYVQNADAMVPAYPTFEEDELIMYITVWLDRSMRRYK
HAEIRERFREVIPSFPAFDRCNKKPEYASSLLGRASYFVIRS
NT seq 3729 nt   +upstreamnt  +downstreamnt
atggccgggccgcgcgcaggaaactcgagggccaacggcgccgccaacggggacacgtcg
aacaacaagcagtcactcaacgagcccctcgataaggagctgtacggcggaaacaatggc
gactacgtcagttccatcgccgttgccgacgacgacaacgacatggaggacgtccaactg
aatggccggagccttgtcgggcagtacacagcatccaaggagatgatgaacgaattcgcg
cacggcgatgcgggagaggcggatatcctcgacagtcgcgagaagcaggctcagatcgca
tcacgcgagactgactaccagcgacggcgattcgaccgcgcactctctccatcgcgggca
gatccgtttgccaaggatggcgaagacggtggccagtcgtacaaggacgtgatgaagcag
cgcgagtttgagcgcgaagaagcgcgtgtaaagaagttgatcgaggagaaggaaaggacg
ggggggaacgaggtacttgaccacaagcctacgctcaaagacgatgagtctactcccgtc
gatggcgacaagactccgccgatgaagaagactcgcaagaggagacggtgggacgaggct
ggcgacgccgaaacccctgcgatcaaggaagaggccgacggcgtcaaggttgagtcggag
cccaagaagcggtcgcgatggtcacctgcacccgaggacgacaaggtcgaggccgctcag
ccaacccgatcacgttgggataccactgctgtagcccctgccagcacggcaacacccgct
cccgctgcgaacggcgcccgtccagttgcgcagacattcgcattcggtaccgacatctcg
aaccgcaatgctcccctctccgatgagcagctcgacatgatgcttcctggtgaagccgaa
ggatacaaggtcctcgaggcacctccagggtacgagccagtgcggcggccggtgggcatg
cccgcacttccaacaggataccagggtttcttgatcccagaagcagacaacagcttggct
gccatgggcaagcagctgcctacagagattcctggcgttggtgatctgcagttcttcaag
aatgaggacatgaaatactttggaaagctcacagatggtgcagacgagaatgagatgaca
gtggaggaactgaaagagcgcaagatcatgcgactgttgctcaaggtcaagaacggaacg
ccgcctatgcgaaagactgcacttcgacaactaacagacaacgcccggcaattcggcgca
ggagctctcttcaaccagattctgccactactgatggagcgcacgttggaggatcaggag
cgccatttgcttgtcaaagttatcgatcgtgttctttacaagctcgacgaccttgtccga
ccctacgttcacaagatcctcgttgttattgagcctcttcttatcgaccaggactactat
gcacgtgtcgaaggtcgggaaattatttccaaccttgcaaaggctgctggtctcgcccac
atgatcagtacaatgcgtccagatctagatcaccaagacgaatacgtccggaacactacc
gctcgagccttcgccgtcgtcgcatccgccctaggtatccccgctctcctccccttcctc
cgagctgtatgtcgatccaaaaagtcgtggcacgcgcgtcacactggcgtgaagattgtt
cagcagattcctatattgatgggttgtgctattctccctcacctcaagggactcgtggag
tgcatcggcgagaatttgaacgacgaacagccaaaggtccgcatggtcacagctcttgcg
cttgctgccctggccgaagctgccagcccgtacggtatcgagtccttcgacgacatcttg
aatcctctttggaccggagctcgtcgccaacgtggtaaggctcttgcatctttcttgaag
gctgtcggttatgttattccgctcatggacgaggagtactccaactactacacgagtcag
atcatggaaattgtcatccgcgagttccaatcacccgacgaagagatgaagaaagttgtg
ctcaaggtcgtttcccagtgttcaaacactgcaggtgtaacaccagtctacctcaaggac
aatgttctgcctgaattcttcaagcatttctgggtgcgccgtatggctctcgacaagcgc
aactaccgacaggtggtcgacaccactgtggacttggcccagaaggccggtgttgctgag
atagtcggccgcattgtcaacaacatgaaggatgagaacgaagcataccgcaagatgacg
gtcgaaactgttgacaaggtcatcagcaccctcggagctcatgatgtcgaccagcgtttg
gaagagcagctaattgatggtgtcctcgtcgcttttcaggatcagactatcgaggaccct
attgtcatcgacggttttgctacggtcgtcaacgcactgggtgagcgtacaaagacttac
ctacctcagatcgtcgcgacggttctcgctaggcttaacaacaagtccgctacagttcgc
cagcaagcggcggaccttatctcccgaatcactttcgtgatgcagaagtgcgacgaggat
ccacagctcatcaagcttgcgcaggcgctatatgaatatcttggtgaggagtaccctgag
gtccttgggtccattcttggtgctctgcgcgctattgtcacagtcgttggtctccacgct
atgcaaccgcctatcaaagatctgctgcctcgtctgacacccattcttcgcaatcgacat
gagaaggtacaggagaacaccatcgatctggtgggacgcatcgctgatcgaggcgcaaac
tatgtcaaccctcgcgaatggatgcgaatctgcttcgaacttttggacatgctcaaggct
cacaaaaagggtatccgtcgtgctgccaacaatactttcggttatatcgccaaagccatc
ggtcctcaggatgtgttggctacccttcttggtaacctcagagtccaagagcgacagtct
cgtgtctgtactgccgtcgctatcggtatcgttgcagagacctgtgcgccctttactgtc
cttccggcccttatgaatgaatatcgcgtgccggagctcaacgttcagaatggtgtactc
aagtcgttatccttcatgtttgagtacattggcgagatggcgaaggactacgtctacgct
atcacaccacttctcgaggatgctctcattgatcgagaccaagtgcaccgacagactgct
gcttcggtagtcaagcatgttgctcttggttgtgtcggtctcgactgtgaagacgcgatg
attcacttgctcaatctcctttggccaaacttgtttgaaaccagtcctcacgtcattgac
cgcatcattgaggctattgagggtgtccgcaacgccattggtactccgctcgtcatgaac
tacgtttgggccggtctcttccatccagctcgcaaggtgcgacaaccttactggcgcatc
tacaacgatgcttatgttcaaaacgccgatgccatggttccagcttacccaacatttgag
gaggacgagcttatcatgtacatcacagtatggttggatcggagtatgcggcgttacaag
cacgctgagataagggagcgtttccgtgaagttatcccatctttcccagcttttgatcgt
tgcaacaagaaaccggagtacgcttcctcattactaggccgggcgtcctattttgtcata
cgctcttga

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