Alternaria alternata: CC77DRAFT_1015294
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Entry
CC77DRAFT_1015294 CDS
T05291
Name
(RefSeq) PRP38-domain-containing protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
aalt
Alternaria alternata
Pathway
aalt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC77DRAFT_1015294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_1015294
Spliceosome [BR:
aalt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
CC77DRAFT_1015294
Complex C
U4/U6.U5 tri-SnRNP related factors
CC77DRAFT_1015294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
29109584
NCBI-ProteinID:
XP_018391376
JGI:
1015294
UniProt:
A0A177E1V1
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MSKPQFDRADASALLDDRGYRGALIRGQNPALLFEKGVRERITESYYWKEQCFGLNAATL
CDRAADLKFIGGTTGITGKPTPFLCLAFKMLQLVPDKEIILEYLNFRDDEEDEGQDAEVK
KEENGHTSEDEDATKKALDLNAAGKLGDFKYLRCLAAFYIRLAWEPVEIYQTLEPLLTDY
RKIKRRLKDAFTLTHVDQFIDDLLTKDRICATSLWKLPSRANLEDLDMLEPRESPLGDEI
DELDEDLDRRSDGSARSYRSRSYQSRSRSRSRSYDSRSRSRSRSYDSRDRGRSRSPGQLS
RSRSRTRSRSRSSRRD
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagccccagttcgaccgcgcagacgccagcgcgctcctcgacgacagaggctat
cgcggagcgctcatcagagggcagaaccccgcgctactcttcgaaaagggtgtgcgtgag
cgcatcaccgagtcatactactggaaggagcaatgtttcggtctgaacgctgcgacgtta
tgcgatcgcgccgcagacctcaagttcatcggcggcacaacaggcattaccggcaagcct
acgccattcttgtgtctggccttcaagatgctgcaactagtgccggacaaggagattata
ctagaatacctgaactttcgcgatgatgaggaggacgagggccaagacgccgaggtcaag
aaggaggagaacggccacacatcagaagacgaagacgcaaccaagaaggcgctggacctg
aatgcagcaggcaaactcggcgacttcaagtacctgcgctgcctcgccgccttctacatc
cgtctcgcttgggagcccgtcgaaatctaccagaccctcgaaccccttctcaccgattac
cgcaagataaagcgacgtctcaaagacgcctttacactcacacatgttgatcagtttatc
gacgatctccttacaaaagaccggatatgcgcgacgagtctgtggaagttgccgtcacgg
gcgaacctggaggatttggacatgctggagccaagggagagtccgttgggcgatgagatc
gatgagctggatgaagacttagacagaagaagtgatggaagcgcaaggagttataggagc
aggagttatcaaagcaggagtaggagcaggagcagaagttacgatagtcgaagtcgcagc
agaagtcgcagttatgatagccgggatcggggaaggagtcgcagtccgggacaactgagt
cggtcaagaagcaggactcgcagtaggagtagaagtagcaggcgggactag
DBGET
integrated database retrieval system
