Alternaria alternata: CC77DRAFT_1016431
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Entry
CC77DRAFT_1016431 CDS
T05291
Name
(RefSeq) DNA-directed RNA polymerase subunit D
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
aalt
Alternaria alternata
Pathway
aalt03020
RNA polymerase
aalt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CC77DRAFT_1016431
09124 Replication and repair
03420 Nucleotide excision repair
CC77DRAFT_1016431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalt03021
]
CC77DRAFT_1016431
03400 DNA repair and recombination proteins [BR:
aalt03400
]
CC77DRAFT_1016431
Transcription machinery [BR:
aalt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CC77DRAFT_1016431
DNA repair and recombination proteins [BR:
aalt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CC77DRAFT_1016431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
29109808
NCBI-ProteinID:
XP_018390892
JGI:
1016431
UniProt:
A0A177E202
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MDYDPDGGAINVRFLEANSQRANFIVQNFNLETANSLRRVMLAEIPTLAIDVVEVFDNTS
VLADEFVCHRLGLVPLCSKGVEDLLYSRDCDCEGYCDNCAVVLTLNAKCTGSEIMKVYAR
DLVIESRTPNEDVGKPVITDSEETGSCIVKLRRGQAISMKCIAKKGIAKEHAKWAPSAAI
GFEYDPANKLHHLDYWHEEDADKEWPKDEARINLDGGPPNPDEPFNYDAVPTRFFYDVET
VGGLEPDQIVTQGISILQRKLAEIIKELSGGIGGPEDFGGAQSPTLNGAGYGDAGGYTPV
GAPGYGGASSWGGAAQGGATPYGATPYGQNW
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggactacgacccagatggcggcgcaataaacgtccgcttcctcgaggcaaacagccag
cgcgccaacttcatcgtccagaactttaatctcgaaaccgccaactcgctgcgccgtgtg
atgctcgctgagattcccacccttgccatcgacgtcgtagaagtcttcgacaacacatcc
gttcttgccgacgagttcgtctgccaccgtctcggcctcgtgcccttgtgctcaaaaggt
gtcgaagacctgctatactcgcgcgactgcgactgcgaaggctactgcgacaactgcgcc
gttgtcctcaccctcaacgcgaaatgcacaggcagcgagattatgaaagtgtatgcgcgc
gatctggtgattgaatcccggacaccgaatgaggatgtaggcaagccggtcatcactgat
tcagaagagacgggtagttgcattgtcaaactgaggagaggtcaagcgatcagcatgaag
tgcatcgcaaagaagggtattgcaaaggagcatgcgaagtgggcacctagtgcggccatc
ggtttcgagtatgatccggcgaacaagctgcatcatttggactactggcacgaggaggac
gcggataaggaatggcccaaagacgaagctcggataaaccttgacggcggtccccctaac
ccagatgaacccttcaactacgacgctgtcccaacccgtttcttctacgacgtcgaaaca
gtcggtggtcttgaacctgatcagattgtcacgcaaggaatctctatcctacaacgaaag
ctcgccgagattatcaaagaactatccggcggtattggaggcccagaggactttggcggt
gcgcagagcccaacactgaacggtgctgggtatggtgatgccggcggatatactccagtc
ggagcaccgggatacggcggcgcgagttcttggggtggcgcggcacaaggaggtgctacg
ccgtacggtgctacgccatacggacagaactggtag
DBGET
integrated database retrieval system
