Alternaria alternata: CC77DRAFT_1017695
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Entry
CC77DRAFT_1017695 CDS
T05291
Name
(RefSeq) small nuclear ribonucleo protein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
aalt
Alternaria alternata
Pathway
aalt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC77DRAFT_1017695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_1017695
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_1017695
03032 DNA replication proteins [BR:
aalt03032
]
CC77DRAFT_1017695
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CC77DRAFT_1017695
Spliceosome [BR:
aalt03041
]
Complex A
U1 snRNP components
Sm proteins
CC77DRAFT_1017695
U2 snRNP components
CC77DRAFT_1017695
Complex B
U1 snRNP components
CC77DRAFT_1017695
U4/U6.U5 tri-snRNP components
CC77DRAFT_1017695
Complex C
U2 snRNP components
CC77DRAFT_1017695
DNA replication proteins [BR:
aalt03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CC77DRAFT_1017695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
29110052
NCBI-ProteinID:
XP_018389510
JGI:
1017695
UniProt:
A0A177DZ75
LinkDB
All DBs
Position
Unknown
AA seq
94 aa
AA seq
DB search
MTGRGGRGGGKVLLPPINFIFKLLQSRATISVWLYENLGMRIEGKLRGFDEFMNLVIDDA
IEVTLAKKDAPEERRKVGQILLKGDNISLIQQLQ
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactggacgtggtggccgcggcggaggaaaggttctccttccccccatcaacttcatt
ttcaagcttctacagtcacgagcgaccatctcggtatggttgtacgagaacttgggtatg
cgcattgagggaaagcttaggggttttgacgaattcatgaacctcgttatcgacgacgcc
atcgaagtcactctcgccaagaaagacgcgccagaggaaaggcgcaaggtcggccagatc
ctgctcaagggcgacaacatttctctcatccagcagctccaataa
DBGET
integrated database retrieval system
