Alternaria alternata: CC77DRAFT_1019183
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Entry
CC77DRAFT_1019183 CDS
T05291
Name
(RefSeq) U1 snRNP-associated protein Usp104
KO
K12821
pre-mRNA-processing factor 40
Organism
aalt
Alternaria alternata
Pathway
aalt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC77DRAFT_1019183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_1019183
Spliceosome [BR:
aalt03041
]
Complex A
U1 snRNP components
U1 related factors
CC77DRAFT_1019183
Complex B
CC77DRAFT_1019183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
29110374
NCBI-ProteinID:
XP_018387603
JGI:
1019183
UniProt:
A0A177DT54
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MNGPPFAPPAPVWSSAKAADGREYYYNRLTQQTTWEKPDELKDDVERALPGTGWAAHMSN
GRRYYVKTGTTETTWEIPEPVQKKIDEYNQNQQNQRPPPSGPAGWPAGPASGAPAYDNRR
ERDEYRPDRHDRRDDRDRDRDRDRRDDRESGFGGDRPNISFTTGTEHLQFSTPQDAEAAF
MKVLKQMKVQPDWTWLQAVRAGIHDPNWRAIPEPEKREEAFKKYCEDLRAQEKHKEQDRQ
AKLRSDFTAMLRSHPEIKYYTRWKTALPIIEEETIFRSAKDDAERRALFEEYIISLKKAH
EEEEAESRRSALDQIMGLLQGLDLEPFTRWQAAEEKLEQNHEFNSDKFETLTRMDVLNQF
EKHIRQLQREHNDKVQAERRKKHRVERKNRDAFLELLDDLRKSGLLRAGTKWKDIHDTIQ
DDPRYTAMLGQSGSSPLDLFRDALEEEEGKFRTLRRRALDVLEQQRFEVTTATPVEEFLN
IMRKDPRTADIDEQSMHSIYNYVLAKVKKREEEERRDEEYIERSAVDKLRSVIKHLDPPV
SLSDTWEVVRPRVEKTDEYRALKSDTLRESAFDKFMSRLKEKESDRRDRSRRDDRDRDRD
RRDRDREYRNGHSDSHRRHRTRTRSPEHDPYAAERRRAVQDREARYRNNDSTGLSPPRRR
ERRDDDRYERSRRSPGGDHYGLERREREVERERSYVSRADPREATVSLLDYGDSGGRTSS
TRRRRESDESSSKRDRETKRARYSPRAADRKSKTPIPDSAALKKEEEERAIRSGSEEGEI
EED
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaacggccccccattcgcgcccccagctcccgtctggtcgagtgcgaaagcagcagat
ggcagagagtactactacaacaggctcacccagcagacgacatgggagaagcccgacgag
ctcaaggacgatgtagagcgcgccctccctggcaccggctgggcggcacacatgtcgaac
ggcagacgatactacgtcaagactggcacgacagagacgacgtgggagattcccgagcct
gtccagaagaagatcgacgaatacaaccagaaccagcagaatcagcgccctcccccttca
ggtcctgccggatggccagcgggcccagcctcgggtgcgcctgcctacgacaacaggcgc
gaacgcgacgagtaccgccccgaccgacacgatcgccgtgatgaccgcgaccgtgaccgc
gaccgcgaccgccgcgatgatcgcgagtctggctttggcggcgaccggcccaacatcagc
ttcacaacgggaaccgagcacctccaattctcaaccccacaagacgccgaggctgccttc
atgaaggtgctcaagcagatgaaagtgcagcctgactggacttggctgcaggctgtgcgc
gccggtatccacgaccccaactggcgcgccatccctgagccggagaagcgtgaggaggcc
ttcaagaagtactgcgaagacttgcgcgcccaggagaagcacaaggagcaggaccgccag
gccaagctacggtccgactttaccgccatgttgcgctcgcaccccgagatcaagtactac
acgcgctggaagactgctctgcccatcatcgaggaggaaaccatcttccgctctgccaaa
gacgatgccgagcgcagggctctgtttgaggaatacatcatctctttgaagaaggcgcat
gaggaggaagaggcagagagcaggcgatccgctctcgaccaaatcatgggtctgctgcag
ggcttggatttggagccgtttacgcgctggcaggcagctgaggagaaactggaacagaac
cacgagttcaacagcgacaagttcgagactctgactcgaatggacgttctgaaccaattc
gagaagcacatcaggcagctccagcgcgaacacaacgacaaggttcaagccgagcgacgc
aagaagcaccgtgtcgagcgcaagaaccgcgatgcgttcctcgagctcctagacgatctt
aggaaaagtggtttgctccgtgccggtaccaaatggaaggacattcacgatactatccag
gacgacccgcgctacacggctatgcttggacagagtgggtcgtcgccacttgatctattc
cgcgatgctctggaggaagaagagggcaagttccgcaccctgcgccgaagagcgcttgac
gtgctggagcaacaacgcttcgaggttaccacagcgacccctgtggaagagttccttaac
attatgcgaaaagatcctcgcaccgctgatattgacgaacagtccatgcatagcatctac
aactacgtccttgctaaggtcaagaagcgcgaggaggaagagcgtcgagacgaggaatat
atcgagcgctcagctgtggacaaacttcggtctgtgatcaagcaccttgatccaccagtg
tctctatcagacacttgggaagtggtacgtccccgcgttgaaaagacagacgagtatcgc
gcactgaaatcagataccctccgcgagtcggctttcgataagttcatgtcccgcttgaag
gagaaggagagcgatcgcagggatcgaagtaggcgcgatgatcgcgaccgtgatagggac
aggcgcgaccgagatcgtgagtatcgcaatgggcattctgattctcatcgtcgtcatcgt
acgcgaactcgctcacctgaacatgatccgtacgctgcagagcgccgtcgtgcggtgcag
gacagggaggcgcgctacaggaacaacgacagcacaggcttatctcctccccgacgccgt
gagcgccgagatgacgatcgctatgagcgctctcgtcgcagccccggtggtgatcattac
gggcttgagcgtcgcgagcgtgaagtcgagcgcgagcgatcctacgttagcagggccgac
cctcgtgaggccaccgttagtctgcttgattatggcgatagcggcggtcgcacctcgtcg
actcgacgccgtcgggaaagcgacgagagctcttctaagcgtgatcgtgagaccaagcgt
gcccgctattctccacgcgccgccgatcgtaagtcgaagactcccatccccgattccgcc
gccctcaagaaggaagaagaagaacgtgctatccgtagtggaagtgaggagggtgaaatc
gaggaagattag
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