Alternaria alternata: CC77DRAFT_1019584
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Entry
CC77DRAFT_1019584 CDS
T05291
Name
(RefSeq) transcription initiation factor IIF
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
aalt
Alternaria alternata
Pathway
aalt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC77DRAFT_1019584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalt03021
]
CC77DRAFT_1019584
Transcription machinery [BR:
aalt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CC77DRAFT_1019584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
Tau95
AAA_5
TssR_C
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
29110456
NCBI-ProteinID:
XP_018387096
JGI:
1019584
UniProt:
A0A177DPK7
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MNGIKPEVKEEPGVGFMDDDFYEDTGEMSINKDNPQQDVWLTRIPDWLYEAVSKWEDIAD
GNDNDQIQIGEVCAFATTSGIDKDKPMRVFLNDRWRAKSNLPSAFQLDPAAASDVQLGNT
YVFTEKDLPGFKGQQGYGYGRGQQGSFGGVQDPNARVQKRSKYKKAIPKQTALVGHATRQ
YNANPLETKEFKDFSAARIKQAIQGSHTTTIITKDTEVSDVNNSITLNNRFKNFIKPTTK
AKSQQNKAARMARSDLIDVLHQLFDEYQYWPMKAIKQRTKQPEQYLKEVLSDIALLVKSG
PFASNWKRQAVFDNQRDTSKQAEAAAPEGPGDGDTEGEDEMEDVV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcattaagccagaggtcaaggaagagcctggcgtcggcttcatggacgatgac
ttctacgaggatacgggcgagatgtccatcaacaaggacaacccacagcaagacgtctgg
ctcacgcgcattccagactggctctacgaggcagtctccaagtgggaagacattgccgac
ggcaacgacaacgaccagattcagatcggagaggtgtgcgctttcgcgacaacgagcggc
atcgacaaggacaagcctatgcgcgtcttcctcaatgaccgttggcgtgcaaagtccaac
cttccctcggccttccagttggaccctgcagccgcctccgatgttcagctaggcaacaca
tacgtgtttacagagaaggatctgccgggattcaagggacaacaaggctacggctatggc
agaggccaacagggaagctttggtggtgtacaagatccgaatgcgcgtgttcagaaacga
agcaaatacaagaaggcaattcccaagcagactgcgctcgtcggtcacgcgacacggcag
tacaacgcgaaccctctcgagaccaaggaattcaaggacttcagtgccgcgcgcatcaag
caagccattcaaggctcccacacaaccaccatcatcacaaaagacaccgaagtctcagac
gtcaacaactccattacactcaacaaccgcttcaagaacttcatcaagcctacgaccaag
gcgaaatcgcaacagaacaaggctgctcgtatggctcgttccgaccttatcgatgtactt
caccagttgttcgacgagtaccagtactggcctatgaaagccatcaagcaacggaccaag
cagccggagcagtacctcaaggaagttcttagcgacattgcgctcctcgtcaaatctggg
ccgtttgcaagcaactggaaacgccaggctgtattcgacaaccagcgagacactagtaaa
caagcagaggcagctgcacctgagggcccgggtgatggagataccgagggagaggatgaa
atggaggacgtagtttag
DBGET
integrated database retrieval system
