Alternaria alternata: CC77DRAFT_1020727
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Entry
CC77DRAFT_1020727 CDS
T05291
Name
(RefSeq) RNA-binding domain-containing protein
KO
K14573
nucleolar protein 4
Organism
aalt
Alternaria alternata
Pathway
aalt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CC77DRAFT_1020727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aalt03009
]
CC77DRAFT_1020727
Ribosome biogenesis [BR:
aalt03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CC77DRAFT_1020727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
29110716
NCBI-ProteinID:
XP_018385607
JGI:
1020727
UniProt:
A0A177DL12
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MAPRRKRQRLSLDGAEAVTATADVEQPSKPSTAAPKEAARRQLFVRGLAPTVTTEDLTEY
FSESYPIKNALVVLDKETRESKSYGFVTFADVEDAQRAKEELNNTEIKGKKIKVDFAEAR
QREGEEKRPRAGDRAKAEREQQIKDAQTPKLIIRNLPWTIKTPEDLQKLFRSYGKVNFVN
LPKKPNGELRGFGFVSLRGKKNAERAIQELNGKEVGERPIAVDWAVDRDTWQSLQKTEQE
GDDAKDEGEDEDEDMEDAESSAVSSDEDDDEEDDSEDDEDLDDSNTDYEDISEDDEDGGV
ELDQEDTRPKREEYTVFVRNVPFTVDDERLKEHFQQFGGVRFARVVVDRETERPKGTGFV
SFFSEEDMINCLKGVPRVKLQKRNLDKKDGSTITVTHSVLEDEDADPTGKYTIDGRILQI
SRAVDKNEATRLTAEGAASRFSRDKDKRRLYLLSEGTISSNSPLYQKLSPSEIKMREESA
TMRRKQIQENPSLHLSLTRLSIRNIPRSITSKDLKQLARSAVVGFAADVKEGKRQKLNKE
EVIRGGQEMLVAEKMRKKKGKGIVKQAKVVFETPAGSKVSEDTGAGRSRGYGFIEYYTHR
NALMGLRWLNGHAVDYKIKSGPTPKSKKAAQEALEDKRKRLIVEFAIENANVVNRRSDRE
EKSREAPKSKADGEADNSDAEPGATQGQKRKRSSSSATQNSGKGKKNGKGKQGTGAAEAD
AEAAAAVKSKDGKLAQRTRIIAKKRQARKARKAGK
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggctccccgtagaaagcgccagcggctctcgctcgatggagcagaagcagtcacagcc
accgccgatgttgagcaaccctcgaagccttccacagcagcgcccaaagaagctgcacgc
agacaacttttcgttcgcggacttgcgcccactgtcaccaccgaagacctgaccgaatac
ttctccgaatcatacccaatcaagaatgcgctcgtcgtgctggataaagaaactcgcgaa
tccaagagctacggtttcgtcacattcgccgacgtggaggatgcgcaaagagcaaaggag
gagttgaacaacacagaaatcaagggaaagaagattaaggtcgactttgccgaggccaga
cagcgagagggcgaagagaagcgtccccgggctggtgacagggccaaggcagagcgcgag
cagcagatcaaggatgcgcaaacaccaaaactcatcattcgcaaccttccatggactatc
aagacgccagaagatttacaaaagttgttcagaagctatggcaaggtcaactttgtcaat
ctgcccaagaagccaaatggtgaactgagaggctttggcttcgtctcgctaagaggaaag
aagaacgcggagagagcgatacaggaactcaacggcaaagaggttggcgagaggcccatc
gctgtcgattgggccgtggatcgagacacatggcagagcctgcaaaagaccgagcaggag
ggcgacgatgccaaggacgagggggaggacgaagatgaagacatggaagatgcggagagc
tctgccgtcagctcggacgaagatgacgacgaggaagacgatagcgaagacgacgaggat
ctcgacgatagcaacaccgactacgaagacatatcggaggatgacgaggacggtggtgta
gaacttgaccaagaagacacccgaccaaagcgcgaggagtacaccgtcttcgtacgcaat
gtccccttcacagtagacgacgagcgtcttaaggagcacttccagcagttcggtggcgtc
cgattcgcgcgtgtcgtggtcgatcgcgaaacggaacgaccaaagggtacgggattcgtc
tcgttcttttcggaagaagacatgatcaattgcctgaagggagtcccgcgcgtcaagcta
cagaagaggaatctcgacaagaaagacggctccaccatcacggttacacactctgtactc
gaagacgaagatgccgacccaactggcaaatacaccatcgacggccgtatcctacaaatc
tcacgcgcagtggataagaacgaagccacccgtctgacagcagaaggcgctgcttcgcgc
ttcagtcgcgacaaagacaagcgccgtctctaccttctctccgagggaaccatctcctct
aactcgcccctataccagaagctctcgccctctgaaatcaagatgcgcgaagagagcgca
acaatgcgacgtaagcagatccaagagaatccttcgcttcacttgtcccttactcgcctg
tctatacgcaacattccccgcagtatcacatctaaggacctgaagcaacttgctcgtagc
gccgtcgttggcttcgcagccgatgttaaggagggcaagcgtcagaaacttaacaaggag
gaagtcatccgtggcggtcaagaaatgcttgtcgccgagaaaatgcgtaagaagaagggc
aaaggtattgtcaagcaagccaaagtcgtcttcgaaacacctgctggtagcaaagtttcc
gaagatactggtgcaggaaggagtagaggatacggattcattgagtactacacgcaccga
aatgcacttatgggcctgcgatggctcaacggccacgctgtagactacaagatcaagtct
ggccctaccccaaagagcaagaaggctgcccaagaagcgctggaagataaaagaaagcgc
ctcatcgtcgagttcgccatcgaaaacgccaacgttgttaaccgacgttcggaccgcgag
gaaaagtccagagaagcacccaagtcaaaggcggatggcgaggctgacaacagcgatgcc
gagccgggtgcgactcaaggtcagaagcgcaagcgtagttctagctctgcaacccaaaat
tcgggcaagggtaagaagaacggcaaagggaaacagggtacgggtgctgcggaagctgac
gcggaagccgccgctgcagtgaagagcaaagacgggaaactggcacagaggacgagaatc
attgcgaagaagaggcaagcgaggaaagcaagaaaagctggaaaataa
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integrated database retrieval system