Alternaria alternata: CC77DRAFT_1022176
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Entry
CC77DRAFT_1022176 CDS
T05291
Name
(RefSeq) splicing factor, CC1-like protein
KO
K13091
RNA-binding protein 23/39
Organism
aalt
Alternaria alternata
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_1022176
Spliceosome [BR:
aalt03041
]
Common components
Common spliceosomal components
General mRNP proteins
CC77DRAFT_1022176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
29111004
NCBI-ProteinID:
XP_018384051
JGI:
1022176
UniProt:
A0A177DHF4
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MSTQAAVEALLEETAREVEMKDAERTASSEARDTDSRRDDRHSDRRDRRDRSRDRGDRHR
ESNGDRRRSRDRDHRRRDGSRPRSSKGADTDEDRDRPRRSSSRDRRGGRGGRDRGGDFYS
GGGRPRSRSPRDRGNDRYRDRSRDRRPRNGGDERRNSRRNATPPEPEVTEDDRDKRTIFV
QQISQRAETRHLRTFFERVGPVVEAQIVKDRVTGRSKGVGYVEFKDEASVPQALELTGQK
LKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFSVTEKDLQEIFEPFG
ELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEMNGFELAGRQIRVGLGNDKFTPE
STANLLRTFTQQAQSYQGSAFSGAGGRGAYAGGSGGVFDRTHSKDDRGVSGASALDDTDV
AGVNYKTYDRSRLMDALARRDVPDSKQGSQSAMPTPTTRKPAAPAPATPMASKCVKIENV
FDADEEQRNWGDNWVKDLEVEIKAECDKKYGKVVHIAVDANSEGDVFVKFDSVSGGEKAL
QGLNGRTFNSRTIRASYVVDKIYNSLWGAAASRF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccaggccgcagtcgaagccctcctcgaggagacggcccgcgaggtcgagatg
aaggacgccgagcgcaccgccagcagcgaggcgcgcgacaccgacagccgccgcgacgac
cgccattcagaccgccgagaccgtcgcgataggagccgagaccgtggggaccgtcatcgt
gagtccaatggagaccggcgacgaagccgcgacagagaccaccgccgaagagacggaagc
cgtcctcgttcaagcaaaggtgctgacacagatgaagaccgtgataggccccgccgcagc
agctcgcgcgaccgccgtggaggtcgtggaggccgtgaccgtggaggcgacttctatagc
ggtggaggtcgtccgcgttcccgctcccctcgcgaccgtggcaacgataggtaccgcgat
aggtcgcgcgaccgccgtccccgcaacggtggtgatgagcgccgcaacagccgtcgcaat
gccaccccgcccgagcccgaggtcaccgaagacgaccgcgacaagcgcaccatcttcgtc
cagcagatctctcagcgcgctgagacccgccacttgcgcaccttcttcgagagggttggc
cctgttgtcgaagctcagatcgtcaaggaccgagtcactggccggtccaagggcgtcggc
tacgttgagttcaaggatgaagcgtctgttccccaagcactggagctgactggccagaaa
ctgaagggtgttcccatcattgcccagcttactgaagcagagaagaaccgtgctgctcgt
ccctctgagggtggtgctgcccccggtgccaacggcgcccctttccaccgtctctacgtt
ggcaacatacacttcagtgtcaccgagaaggatctccaggagatcttcgagcctttcggt
gagcttgagcaggtcatcctccagcgcgatgagatgaatcctggccgatccaagggatat
ggtttcgttcaattcgttgatccttcgcacgctaagaatgctctcgcagagatgaacggt
ttcgagctcgctggccgccagattcgcgtcggtctcggcaatgacaaatttaccccagaa
tcgaccgccaacctcctacgtactttcactcaacaagcacaatcctaccagggctctgct
ttcagtggtgccggtggccgaggcgcctatgctggtggttccggtggtgtcttcgaccgt
acccacagcaaggacgaccgcggtgtcagcggagcctctgcgcttgatgacactgatgtc
gcaggagttaactacaagacttatgaccgcagcagactcatggatgctctcgctcgccgc
gacgtccccgactccaagcagggcagtcagtctgccatgcctacacctaccactcgcaag
cctgctgcccccgcccccgccactcccatggcttccaaatgcgttaagatcgagaacgtc
ttcgatgctgacgaggaacaacgcaactggggcgacaattgggtcaaggaccttgaagtc
gagatcaaggctgagtgcgacaagaagtacggcaaggtcgttcatattgctgttgatgcc
aacagcgaaggagacgtctttgttaagtttgactccgtctctggtggtgagaaggctctc
caaggtcttaatggtcgcacgttcaacagccgcactatccgcgcctcgtacgttgtcgat
aagatctataactccctttggggtgctgctgcaagcaggttctaa
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