Alternaria alternata: CC77DRAFT_1024144
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Entry
CC77DRAFT_1024144 CDS
T05291
Name
(RefSeq) transcription initiation factor-like protein iib
KO
K03124
transcription initiation factor TFIIB
Organism
aalt
Alternaria alternata
Pathway
aalt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC77DRAFT_1024144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalt03021
]
CC77DRAFT_1024144
Transcription machinery [BR:
aalt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CC77DRAFT_1024144
Prokaryotic type
Archaeal type
TFB
CC77DRAFT_1024144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
PPR_long
Motif
Other DBs
NCBI-GeneID:
29111409
NCBI-ProteinID:
XP_018381680
JGI:
1024144
UniProt:
A0A177DBI5
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MSYAPDGRLLSPGEVYEAAPAPVKEDEWQEDLNVAMICPDCKENPPNLVEEFSAGDTICG
SCGRVLAERTIDTRSEWRTFSNDDQGNDDPSRIGDAANPLLHGSQLQTEIGFGDGGMRVR
DLSRAHNKSNHDKVNKALQAAYGQISALCDSQNISRPTAETAKMLFKMTDDAKLFKGKSQ
DAIIAGCIFIACRKHDQQRSFREIFKMTNVSKKEVGRTFKVLEAFIQKSQNSGPSVAGNG
AVIDTVNLLNQKGGTTATSAASLMPRACAKLALGTQVQMVAEECADQVAHYGVAAGRSPL
SIAGACLYLVSHLMGQPKSPKEIGLAVEVSDGTIRTAYKLMHLEQDKLIKEEWIAKGGDR
SRIPQA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgctcccgatggtcgcctgctgtcgcctggcgaggtctatgaagccgcgccc
gcgcccgtgaaagaagacgagtggcaggaggacctgaacgttgccatgatctgcccggac
tgcaaggagaatcctccgaatctagttgaagagttcagcgccggcgacaccatttgcggt
tcctgcggtcgcgtacttgcagagaggactatagacacgcgctctgagtggcgcactttc
tccaacgacgatcaaggaaacgacgatccctcgcgtatcggagacgccgcgaacccgctg
cttcatggctctcaactccagacggagatcggttttggcgacggtggtatgagagtccgc
gacctgagccgcgcgcacaacaagagcaaccacgataaagtcaacaaggcgttgcaggcc
gcatacggacagatctcggcgctctgcgactcacaaaacatcagtcgcccgaccgccgag
acagccaagatgctgttcaagatgaccgacgacgccaaattgttcaaaggcaaatcgcaa
gacgctattatcgccggctgcatcttcatcgcgtgtaggaagcacgaccagcagcgcagt
ttccgcgagatcttcaagatgaccaacgtcagcaagaaggaagtcggccgtacattcaag
gttctcgaggccttcatacaaaagtcgcagaacagcgggccctccgtcgcaggcaacggt
gccgtcatcgacaccgtcaaccttctcaaccagaaaggcggcaccacagccaccagcgct
gcgagtctcatgccccgtgcctgcgccaaacttgcccttggaacacaggtacagatggtt
gcagaggaatgcgcggatcaggtcgctcattacggagtcgcagctggacgttcgccgctg
tccatcgctggtgcctgtctctatctcgtctcccatctcatgggccagcccaagtctccg
aaagagattggtctcgcagtcgaagtcagcgacggaacgatccgcactgcatacaagctc
atgcacttggaacaggacaagctcatcaaggaggaatggatcgcaaagggtggcgatcgc
tccaggattccgcaagcatag
DBGET
integrated database retrieval system
