Alternaria alternata: CC77DRAFT_1024822
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Entry
CC77DRAFT_1024822 CDS
T05291
Name
(RefSeq) DNA replication factor C, large subunit
KO
K10754
replication factor C subunit 1
Organism
aalt
Alternaria alternata
Pathway
aalt03030
DNA replication
aalt03410
Base excision repair
aalt03420
Nucleotide excision repair
aalt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CC77DRAFT_1024822
03410 Base excision repair
CC77DRAFT_1024822
03420 Nucleotide excision repair
CC77DRAFT_1024822
03430 Mismatch repair
CC77DRAFT_1024822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aalt03032
]
CC77DRAFT_1024822
03400 DNA repair and recombination proteins [BR:
aalt03400
]
CC77DRAFT_1024822
DNA replication proteins [BR:
aalt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CC77DRAFT_1024822
DNA repair and recombination proteins [BR:
aalt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CC77DRAFT_1024822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_33
RuvB_N
AAA_16
AAA_28
nSTAND3
AAA_14
T7_gp14
AAA_5
NACHT
AAA_18
Motif
Other DBs
NCBI-GeneID:
29111537
NCBI-ProteinID:
XP_018380877
JGI:
1024822
UniProt:
A0A177D7D9
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MPADIRSFFGGGPPKGSQDAKKKDEPAPKKAAPKKKGRASRVVEDSDDDDEEDAKPKKTT
PKKPAAKKVKREPTPEPVLEETTTSDFFASSNKPKRTGPVKKAVDEPATTPKKAPAKANG
KASKTTTPASTTKKSGRTKKPVTSYAERDDEDEFPDDDLDDADDIFQDNIKGKGKDDYKE
EPESGDDMPVQLPHRGTPKAPAKQQKTIKDEDDFDPEDEDVDMKDIDAEDDFVQPDEDEQ
ALKSKPKKTSTAGKKRKSPIPDEEEEGEEEDEKPKKKAPKKAAPAKSPAKKKAKKEELED
SADIQAIYDSIPTVRAPTPPPKDENAKFNWQANAGRGDVAPAGGSSGDMPQGSDTCLAGL
TFVFTGVLQKWGRTEAQELVKRHGGKVTGAPSKKTSYVVLGTDAGPSKLQKIRDMDIKTI
DEDGLTQLIEKLTAAGNKGDSKAQAEYAEKQRKEQEKIEKQAAELEQEEKKRQKEQAAAQ
AAASKKSGSTVSAATSSTGPAVDSRLWTTKYAPTSLTQICGNKATVEKIQRWLQAFPKNL
KTGFKLAGKDGSGVFRAIILHGPPGIGKTTAAHLVAKLEGYDIVERNASDTRSKKLIEDG
LRGVLSTNSLHGYFAGDGKQVEGSRKKLVLIMDEVDGMSAGDRGGVGALAAVCKKTEVPM
ILICNDRKLPKMKPFDYVTYDLPFRRPTVDQVRSRVMTIAYREGLKLPPTVVNALIEGSH
SDIRQVVNMISTAKLDQEAMDFDKGKTMSKNWEKHVILKPWDITQKILGGGMFASSSKAT
LNEKIELYFNDHEFSPLMLQENYLGTNPILSGQYGGKEKNLKNLELVSQAADSISDGDLV
DRMIHGSQQQWSLMPTHAVFSFVRPASFVSGSTAGNGTRFTSWLGKNSTTNKLSRMIKEI
QAHMRLRSSGDRHEVRQQYVPLLWHDLVNKLQKEGKDAVSQVIELMDSYYLTKDDFDAIM
ELGVGPMDQEKVKIDSQTKSTFTRLYNQQSHPLPFMKASSVTAPKGKQAKEKPDLEEAID
ESDDGELVEEIKDEEEDVDLSKDKYVKQPKKKAAPKKAAAKKGGKQKKDDDDEMEDDEDE
EDVKPKGKAKAKAKAVPKGKKK
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgacattcgcagcttctttggcggcggacccccgaagggcagccaggacgca
aagaagaaggatgagcctgcgccgaaaaaggccgcacccaagaagaagggacgcgcaagt
cgagttgtagaagactctgacgatgacgatgaggaagacgcgaagcccaagaaaaccaca
ccaaagaagccagccgcgaagaaggtcaagcgcgagccgacaccagaacccgtactcgaa
gagactaccacatccgatttctttgccagctcaaacaaacccaagcgaaccgggccagtc
aagaaagctgtggacgagcctgctacaacaccaaagaaggcgcctgcaaaggcaaatgga
aaagcgtcaaagacgactactccggcatctaccacaaaaaaatctggtcgtacaaagaaa
cccgtcacatcctatgccgagcgggacgacgaagatgaattcccggacgatgacctagac
gacgcagacgacatcttccaagacaacatcaagggcaagggcaaggatgattacaaggaa
gagccagagagcggcgacgatatgcctgtacagttgccacatcgtggaacaccgaaagcg
cccgcaaaacagcaaaaaacgatcaaagacgaagacgacttcgatccggaagacgaggac
gtcgacatgaaagatatcgacgcggaagacgattttgtccagcctgacgaagatgaacaa
gcgcttaagagtaagccaaagaagacgtcaactgcaggcaagaagcggaagtcacccata
ccagatgaggaagaagagggcgaggaggaagacgaaaagcccaagaaaaaggcaccgaag
aaagccgctccagcaaaatcgccagcgaagaagaaggcgaagaaggaggagcttgaagac
agcgcagatatccaggccatctacgacagcattcctaccgtgcgagcacccacacctcca
cccaaagacgaaaacgccaagttcaactggcaagcaaacgcgggccgtggcgatgttgcg
cctgctggaggctcatctggtgacatgcctcagggctcagatacatgtcttgcaggtctg
acatttgttttcactggcgtattacagaaatggggtcggacagaagcccaagagctcgtc
aagcgacatggcggaaaggtcacaggtgctccaagtaagaagaccagctatgttgtacta
ggcacagatgctggtcctagcaaactgcagaagattcgagatatggacatcaagacaatc
gacgaagatggactgacacaactcattgagaaactgacggcagctggcaacaaaggtgac
agcaaagcccaagctgagtatgctgagaaacaacgcaaagaacaagagaagattgagaag
caagctgccgagctcgaacaggaagagaagaagcgccaaaaagagcaggcagcggcacag
gcagcagccagtaagaaatcgggctcaacagtttcagcagctacttccagtacaggtcct
gctgtcgactcacggttgtggaccaccaaatatgcgcccacatcactcactcaaatatgt
ggcaacaaagcaaccgtcgagaagatacaacgctggctgcaagctttcccgaagaatctc
aagactggtttcaagttggccggtaaagatggtagcggagtattccgtgccatcattctg
catggtccgcctggtatcggcaagactactgcagcgcatcttgtcgcaaagctcgaaggc
tatgacattgttgaaaggaatgccagtgatacccggagtaagaagctgatcgaagatggt
ctacgtggcgttctgagcaccaactcactccacgggtactttgctggagatggaaagcag
gttgaaggatcaaggaagaagctcgttctcatcatggatgaagtcgacggcatgtctgcg
ggtgaccgcggtggtgtcggtgcgctcgcagctgtctgcaagaagacagaggttcccatg
atcctcatttgcaacgacaggaaattgccgaagatgaagccattcgattacgttacctac
gatttgcccttccgacgtcccactgtcgaccaggtacgatcgcgtgttatgactattgct
taccgagaaggcctgaagctgcctccgacagttgtcaacgcactcatcgaaggcagccat
tccgacatccggcaggttgtcaacatgatctctaccgccaaactcgaccaggaagccatg
gatttcgacaagggcaagacaatgtccaagaactgggagaagcatgtcatcttgaagcca
tgggatattacacagaagattctcggtggcggtatgtttgcctcgagtagcaaagctacg
ctcaatgagaagattgaactctacttcaacgaccatgagttcagtccgttgatgttgcag
gagaactacctcggcacaaatcccattctgtctggacagtacggaggcaaagagaagaat
ctgaagaatcttgagctggtatcgcaagcggcagatagtatcagcgacggtgacctcgtc
gatcgtatgattcacggctcccagcaacaatggagtttgatgcctacccacgccgtcttc
agcttcgtccgccccgccagtttcgtctccggcagcacagccggaaacgggacgcgattt
acatcgtggctaggcaagaatagtaccaccaacaaactcagtcgcatgatcaaggagatt
caagcacatatgcggttacgctcttctggtgaccgccacgaagttcggcagcagtacgtc
ccgcttctctggcacgacttggtaaataagctgcagaaggaaggaaaagatgctgtttcc
caggtcatcgagctgatggatagctattacctgactaaagacgactttgacgcgattatg
gaattgggggttgggccgatggatcaggagaaggttaagattgatagtcagaccaagtct
acctttacacgactgtataatcaacaatctcaccctctcccttttatgaaagcgtcatcc
gttactgcaccgaaaggtaaacaagcgaaagagaaaccagatcttgaagaggcgattgac
gagagtgatgatggcgagcttgtggaggagatcaaggacgaagaggaagatgttgacttg
agcaaggacaagtatgtcaagcagcctaaaaagaaggcggcgcccaagaaagctgcagcg
aagaagggagggaagcagaagaaggatgacgatgacgagatggaggatgacgaagatgaa
gaggatgttaaaccgaagggcaaggccaaggccaaggctaaggctgtgcccaaggggaag
aagaagtga
DBGET
integrated database retrieval system
