Alternaria alternata: CC77DRAFT_1026106
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Entry
CC77DRAFT_1026106 CDS
T05291
Name
(RefSeq) U4/U6 small nuclear ribonucleo protein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
aalt
Alternaria alternata
Pathway
aalt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC77DRAFT_1026106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_1026106
Spliceosome [BR:
aalt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CC77DRAFT_1026106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
29111787
NCBI-ProteinID:
XP_018379458
JGI:
1026106
UniProt:
A0A177D429
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MATLEQELLADFADSGDEDVQDLENDFAEGSGDDDMVDEEAQYREKKDKEDKGPADIRSA
QQLKANLDPVLKRIEETQDQMDIVEGESFEESPEYQLLTEANEFSTQIDGETATVHKFIR
DHYSAFFPHLEDLIKNPIVYAKACLVIGGGPLSDIKDISPKLRQIEGMEPAQVMIVEIEA
TRVEGRLLNETELDLVSSACHLLLELHAAKSKILGFVESRTELFAPNLTALIGSLTAAHL
ISYSGGIANLAKTPACNIAPLGSTKVSGATVGLSNMGLRHEGYLYHSDIIQNQRPDLRKQ
ALRIVSAKVILAARVDAHSNSHTADIGMDLRKECERRLDKLVEMPANQKAGGRALPVPDE
KPSRKRGGRRARKAKEATAMTEIRKAQNRMTFGKEEKEVGYGDSVKGMGMIGATDTGRLR
AQQIDPKTRAKLSKKNPGWGTDTTLGAASSLKGFGGSGTATSLRAQGLRTGGVGLGGSGT
GSIAFTPVQGLELIDPRAKEEAARKRKADEDRWFKGGSFTQLNGGGSGKTDAGGFKVPAL
PNKKPRTDA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctcgaacaagagcttctggccgacttcgccgatagcggcgatgaagatgtc
caggaccttgagaatgactttgctgagggttcgggcgacgatgacatggtggacgaagag
gcgcaataccgggagaagaaggacaaagaagacaagggtccagccgacattcgatccgcc
cagcagctcaaggccaacctagaccccgtgttgaagcgcatcgaagaaacacaggaccag
atggacatagtcgagggcgagtcctttgaggagtctccagagtaccaactcctcaccgag
gccaacgagttctccactcagatcgacggcgaaaccgctactgtccacaagttcatccgc
gaccactactcagccttcttcccccacttggaagatttgatcaagaaccccatcgtctac
gcaaaagcatgtctagtcatcggcggcggacccctctcagacatcaaagacataagcccc
aagctacggcaaatcgagggaatggagcctgctcaggtcatgattgtcgaaattgaagca
acacgcgtcgaaggaaggctgctcaacgaaaccgagctcgacctggtatcaagcgcctgc
cacctcctcctcgaactccacgccgccaagtccaagatcctaggtttcgtcgaatcccgc
acagaactctttgcaccgaacctgactgctttgattggaagtttgactgccgcccatctc
atctcctactccggcggtatcgcaaacctagccaaaacccccgcctgcaacatcgcgcct
ttgggctcaacaaaagtctccggcgctaccgtcggtttgtcaaatatgggtttacgacac
gaaggttacctgtatcacagcgacatcatccagaatcaacgcccggatctccggaaacaa
gctctgcgcattgtatctgcaaaggtcattcttgccgcacgcgtagacgcacattccaac
tcgcacaccgccgacattggcatggaccttcgtaaagaatgtgaacgccgtctcgacaaa
ctcgtcgaaatgccagccaaccaaaaagccggtggacgcgcactccctgtacccgatgag
aagccgtcacgtaagcgcggtggaagacgtgctagaaaggccaaggaagcaactgccatg
accgaaattcgcaaagcgcaaaaccgcatgacgtttggcaaggaagagaaggaagtcggt
tacggtgactctgtcaagggcatgggcatgattggagcaacagataccggccgtctccgc
gcccaacaaatcgatcccaagacacgcgccaaacttagcaagaagaaccctggctggggc
acagacacgacgctcggcgctgcatcttccctcaaaggctttggaggcagtggcacggcg
actagtcttcgcgcacagggattgaggacgggaggtgtgggattgggcgggagcggaacg
gggtccattgcttttacgcctgtgcaagggcttgagcttatcgacccgagggccaaggag
gaggcggcgaggaagagaaaagcagatgaagataggtggttcaaggggggtagttttacg
cagcttaatggtggtggtagtggcaagacggatgcgggcggtttcaaggtccctgcgctg
cctaataagaaaccgaggacggatgcttag
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integrated database retrieval system
