Alternaria alternata: CC77DRAFT_1028648
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Entry
CC77DRAFT_1028648 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aalt
Alternaria alternata
Pathway
aalt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC77DRAFT_1028648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_1028648
03009 Ribosome biogenesis [BR:
aalt03009
]
CC77DRAFT_1028648
Enzymes [BR:
aalt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CC77DRAFT_1028648
Spliceosome [BR:
aalt03041
]
Complex A
U1 snRNP components
U1 related factors
CC77DRAFT_1028648
Complex B
CC77DRAFT_1028648
Ribosome biogenesis [BR:
aalt03009
]
Eukaryotic type
Pre-60S particles
Helicases
CC77DRAFT_1028648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phos_pyr_kin
TENA_THI-4
DEAD
Helicase_C
PfkB
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
29112056
NCBI-ProteinID:
XP_018389053
JGI:
1028648
UniProt:
A0A177DXB6
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MTLKRILVIAGSDSSGGAGLEADQKVIAAHGCYAMTATTALTAQNTLGVHDIHHTPPDFV
RKQIDAVCEDVGVDVVKTGMLASPETILITADAFRRYKINTTVIDPVMVSTSGSQLLPET
AISTLIQHLLPCTTLLTPNLPEAQLLLKTAGLNLSDPQNVEDIVSIAHQIQSLGPKWVLL
KGGHLPLTHGRVVTTQDSEKEVVLNILVGDSGVTILESPYLQSKNTHGTGCSLASAIACN
LAKGMSMVKAVKKANLYVEAGIKTAVDLGQGSGPINHFHSVYMLPFTPGNFISYLLDRDD
VQKPWKEYTQHDFVQSMGSGTLPVEKFMYYLVQDYLFLVQFARANALSAYKSSNLKDIGR
SVQQVVTLQEEIQLHIDFCKGYGLSEADIINEEEDQATTAYTRYVLDIGMSQDYLALQIA
LLPCLIGYGIIAKRLYEDPSTVRVGSKYWKWIEQYVAEEYREAMMRGSELVERHAEGLSP
SRVEELAGIFIHATNMERGFWDMGLRAGEEGNLQITIHTPSDSTGSPFTPVPTKHSHIMS
YGGGGYGGGGGGYGGGGGRGGDRGYSNGYENSNAGYESYNNSTSHYASYGGGYGGGSNGY
SGGGGGYGGGGGYGGGGFGGGRDGGDRMSQLGQGLKQQSWDLDTMPKFEKSFYKEDPAVT
ARSAAEVAEYRKEHQMTVKGENIPKPVTTFDEAGFPSYVMNEVKAQGFAKPTAIQAQGWP
MALSGRDVVGVAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQE
ISKFGKSSRIRNTCVYGGVPKGPQIRDLARGVEVCIATPGRLIDMLEAGKTNLRRVTYLV
LDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQLAADYQKDWIQVNIGSMD
LSANHRIQQIVEHLETIMSDKDNKILIFTGTKRVADEITRFLRQDGWPALSIHGDKQQNE
RDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYVHRIGRTGRAGANG
TAITLFTTDNSKQARDLVQILTESKQQIDPRLHEMARYGGGGGGGGRWGGGRGRGGGRGG
RGGWTGGNSDPIRNSRW
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgacactgaaacgcattctggtaatcgctggctcggacagttcgggtggggccggacta
gaagccgatcagaaggtcatcgcggcccatggctgctatgctatgactgctacgactgca
ttgactgcgcagaacacgctcggcgtacacgatatacaccacacgccgccggacttcgtg
cggaagcaaattgacgctgtttgtgaagatgttggtgtggatgtggtcaagactggcatg
cttgcctcccccgagacaatcttgattactgcagacgctttcaggagatataagattaac
accactgttattgaccctgtaatggtgtcgacatcgggctcacagctccttcctgaaacc
gctatctcaacactaattcaacacctcctgccttgcactacacttctcactccgaacctt
cccgaggcacagctgctgcttaaaaccgctggcttgaatctctctgatcctcaaaacgtc
gaagacatcgtctctatagcacatcaaatccagtcactcggaccaaaatgggtattgtta
aagggtggccatctaccattgacacacggccgcgtagtaaccacacaagacagcgagaaa
gaagttgttttgaacatacttgtaggtgatagtggagtcacgatactggaaagcccctat
ctgcagtcaaaaaacacgcatggaaccggatgttcgttagcatccgctattgcatgtaat
ttggctaagggaatgtcgatggtcaaggcggtgaagaaggcaaatctgtatgttgaagca
ggaatcaagacagccgtcgacttgggacagggaagtggcccaatcaaccacttccattca
gtatacatgctgcctttcacaccagggaattttatcagttacctgctggatcgggatgat
gtgcaaaagccgtggaaagagtatactcagcacgattttgtgcagagtatgggttctggg
acattgccagtggagaaatttatgtactacctggtacaagactaccttttcttggttcaa
tttgcaagagcgaacgcactatctgcatacaagtcaagcaacctgaaagatatcggccgc
tccgtgcaacaggtcgtcaccctccaagaagagatacagctgcatatcgacttctgtaaa
ggatacggactgtcagaagctgatatcatcaacgaagaagaggaccaagccactacagca
tacacacgctatgtcctcgacatcggcatgtcgcaagactatctcgccttacagatcgcc
cttctcccctgcctcatcggttacggtatcattgctaaacgtctctatgaagatcccagc
actgtaagggtgggaagcaagtactggaagtggattgagcaatacgtagcagaggaatac
agggaggcgatgatgagggggagtgagctggtagagagacatgccgaaggactaagtccg
agcagagtcgaagagttagctggcatcttcatacacgccacaaatatggagagaggcttc
tgggacatgggcctcagagctggcgaggaaggaaatctccagattacgatacacactccc
tcagactcgaccggttcccctttcacaccagtccctacaaaacactcgcacatcatgtct
tacggcggcggcggttacggtggtggtggtggaggatacggcggcggcggcggtcgcggc
ggtgaccgcggctactcgaacgggtacgaaaacagcaatgctggatatgagtcttacaac
aactcgacaagccactatgcatcgtacggtggcggctacggcggcggttccaacggctac
tccggtggtggaggcggctacggaggaggtggtggttatggtggaggcggctttggcggt
ggtcgcgatggcggtgaccgcatgtcgcaactcggccagggcctgaagcagcaatcatgg
gacctcgacaccatgcccaaattcgaaaagtctttctacaaggaggaccccgctgttact
gcgcgttcagccgctgaggttgccgaataccgcaaggagcaccagatgaccgtcaagggt
gagaacatccccaagcccgtcacaactttcgacgaggctggcttcccatcctacgtgatg
aacgaggtcaaggctcagggtttcgcaaagcccactgctattcaggctcagggttggccc
atggctctctctggtcgcgacgttgttggtgttgccgagactggttccggaaagacgctt
acctactgtcttcctgctatcgtccacatcaacgctcagcctctgctcgcccctggtgac
ggccctatcgtcctgatcctcgcccccactcgtgagcttgctgtccaaattcaacaagag
atcagcaagttcggaaaatcctcgcgcatccgaaacacctgcgtctacggaggtgtcccc
aagggtccccagatccgtgaccttgcacgcggtgtcgaggtgtgcatcgccacacccgga
cgtctcatcgacatgcttgaggcgggcaagaccaacctccgccgtgttacctacctggtt
ctcgacgaggctgaccgcatgcttgacatgggtttcgagcctcaaatccgcaagattatt
ggtcaaattcgtcctgaccgtcaaacctgcatgtggtccgctacatggcccaaggaagtc
cgccagcttgctgccgactaccaaaaggactggatccaggtcaacatcggttccatggat
ctgtctgctaaccaccgcattcaacaaatcgttgagcacctcgagactatcatgagcgac
aaggacaacaagattttgatcttcacaggcaccaagcgcgttgctgacgagatcacccga
ttccttcgtcaggacggctggccggcactttccattcacggtgacaagcagcagaacgag
cgcgactgggtcttgaacgaattcaagacgggcaagagccccatcatggttgccaccgac
gtggcttcccgtggtatcgatgtccgcaacattactcacgtgttcaactatgactacccg
aacaactcggaggactatgtccaccgtattggtcgtactggtcgtgctggcgctaacggt
actgccatcaccctcttcactacagacaactccaagcaagctcgtgatctcgtccagatt
ctcacagagtccaagcagcagatcgatcctcgcttgcacgagatggcccgctacggtggt
ggcggcggtggtggtggtcgctggggaggtggccgcggccgtggcggaggccgtggcgga
cgtggtggctggaccggaggtaacagcgatcccatccgcaacagccgctggtga
DBGET
integrated database retrieval system
