KEGG   Alternaria alternata: CC77DRAFT_1030833
Entry
CC77DRAFT_1030833 CDS       T05291                                 
Name
(RefSeq) RNA-binding domain-containing protein
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
aalt  Alternaria alternata
Pathway
aalt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC77DRAFT_1030833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aalt03041]
    CC77DRAFT_1030833
Spliceosome [BR:aalt03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CC77DRAFT_1030833
 Complex B
    CC77DRAFT_1030833
 Complex C
   U2 SnRNP specific factors
    CC77DRAFT_1030833
SSDB
Motif
Pfam: RRM_1 Calcipressin RRM_5 RRM_occluded DUF4100 DUF4523
Other DBs
NCBI-GeneID: 29112210
NCBI-ProteinID: XP_018386646
JGI: 1030833
UniProt: A0A177DNB2
LinkDB
Position
Unknown
AA seq 180 aa
MATSTRGPPGTVAVSKEGIPNRTLYVRNLPDKLQKEDLKRNLYMLFATYGVILDIVALKT
MKMRGQAHVVFRDVDSSTQAMRALQGFTFFGKDMQIAYAKTKSDTVAKLDGTYKMPEPER
EHEPEQAPAQPAGFGAAPEKAVPVNVQDAAKGQKRGREEEEEEEENSDAEMEMDVSDDSD
NT seq 543 nt   +upstreamnt  +downstreamnt
atggctacttctacgcgaggaccgccaggcaccgtcgccgtttccaaagagggtatccca
aacaggaccttatacgtgcgcaacctccccgacaagctacaaaaagaagacctcaagcga
aacctgtacatgctgtttgctacctatggcgtcatcctcgatattgttgcgctcaagacg
atgaagatgcgaggccaggcgcatgttgtgttccgcgacgttgattcctcgacccaggcc
atgcgcgctctgcaaggcttcactttctttggaaaggacatgcaaattgcgtatgcaaag
accaaatccgacaccgtagccaagctggacggtacctacaagatgcccgagcctgagcgt
gaacacgagcctgaacaagcacctgcgcagcccgcaggtttcggtgctgcacccgagaaa
gcagtacctgtaaatgtgcaagacgcagccaagggccagaagagagggcgcgaggaggag
gaagaagaggaagagaattcggacgcggagatggagatggacgtgagcgacgactcggac
tag

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