Alternaria alternata: CC77DRAFT_1037025
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Entry
CC77DRAFT_1037025 CDS
T05291
Name
(RefSeq) DEAD-domain-containing protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
aalt
Alternaria alternata
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_1037025
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_1037025
03036 Chromosome and associated proteins [BR:
aalt03036
]
CC77DRAFT_1037025
Enzymes [BR:
aalt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CC77DRAFT_1037025
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CC77DRAFT_1037025
mRNA cycle factors
Common to processing body (P body) and stress granule
CC77DRAFT_1037025
Spliceosome [BR:
aalt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CC77DRAFT_1037025
Chromosome and associated proteins [BR:
aalt03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CC77DRAFT_1037025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Abhydrolase_3
BD-FAE
COesterase
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
29112634
NCBI-ProteinID:
XP_018391796
JGI:
1037025
UniProt:
A0A177E341
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MSDTGAPVATATDPAAARKEQQAADLARAQDAGWNNPVPFQYETVVGGTPAEDETRDTAV
WLSDAAIYQWDDEFGDVGEPNPELEKMLFDDQYLQRAGGAIKALSFDITLEGPTKISPVR
NFEDAGLHPVMLDNVKLCQYRAPTPIQAYCIPAILSGHDVVAVAQTGSGKTAAFLLPILS
KLMGKARQLAAPRPNPVRYNPLTDKVRAEPLVLIVCPTRELACQIFDEARRLCYRTMLRP
CVVYGGAPTKNQREQLEMGCDILVATPGRLMDFMQNVNLLSFRRLKFTVIDEADELLSTG
WEEAMEKLFQGSDQNSDADHTYLMFSATFPKSARRLAKEYMDEECVRIKVGRVGSTHQNI
KQQIIFTEESAKSQALFDLIFSEGPQRTLVFTNSKVKCDMVDDYLYNKGLPVTSIHSDRT
QREREDALRSFRTGRCPILVATGVTARGLDVANVKHVVNYDLPSTMHDGITEYIHRIGRT
ARIGNEGKATSFYNDRNEDLGPDLCKILCESKQEIPKFLQEHMPDDPTTIDWHDGTDDES
DDGLGGGFGGDAGGFDVDAGGFGGGGNDSGFGGGGFSVDADDKVAACTALVQIPRFVPLS
ILHITSPKGPHPFLVALPSRRGNLIYIYVFVPPKPVDLEGNGDQDRKETGKWRVPVVLDF
HGGGFIMGSPLEQAPYASMMSRELGAVVISVSYRIGPFHQFPAAIHDAEDVLSAILDTSG
VSKAGKVLREEIQRYYSIIRSDALENKKEPTAPHVEHCETITLDPTRLAISGFSAGGNIA
LNMAISVPPCPELGMSTTLGPHSRTNGPAPADTMSPRLPENRRATILDDPFESWPSLLPP
PQAQPRMLPLLLFYPSLDARLLPHERPMKPLPNALRPDDHHQQKPKAPGLFSIMGPTYLP
RKLRPHPRASPGLNDPVHIQKNAAILLVLPEKDSLAVQSDVWVDKMNNNDWNGPVRFGDG
REGDWDGHRGGQAGSSNVPSTQNGGMEVWHAPGCRHGWTQFPDTFVPQHERNERELVFAR
TLDFVRDNWKKELRVEGRQLGNQIQELRPLSIPSSNE
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacactggagcgcctgtggcaactgcgaccgatcccgctgcagcccgcaaggag
cagcaggcagctgatctcgcgcgtgctcaagatgctggatggaataatcctgtccctttc
cagtacgagaccgtcgttggtggcactcccgctgaggacgagacccgcgacactgccgtc
tggctgtccgatgccgccatttaccagtgggacgatgaattcggtgacgtgggcgagccc
aacccagagttggagaaaatgctgttcgacgaccagtatctccagcgcgccggcggtgcc
atcaaggcgctctcgttcgatataactctcgagggtcccaccaagatcagccctgtccgc
aacttcgaggatgctggtcttcaccctgtcatgctcgacaacgtcaagttgtgccagtac
cgggctccaactccgatccaggcctactgcatccccgccatcttgtccggacatgatgtc
gttgctgttgctcagacaggttccggcaagactgctgcctttctccttccgattctgtca
aagctcatgggcaaggcccgtcaactagctgctccgcgtccaaacccagtccggtacaac
cctttgactgacaaagtccgcgctgagccgctcgtcctcattgtttgtcccactcgcgag
ctcgcctgccagatcttcgatgaggcgcgtcgactgtgttaccgcactatgttgcgtcct
tgcgtcgtctatggtggtgcgcctaccaagaaccagcgcgagcagctcgagatgggttgt
gacatcctcgtcgccactccgggtcgtctcatggacttcatgcagaatgtcaacctgctg
tcattccgccgtcttaaattcacggtcatcgacgaggctgatgagctgctctcgactggc
tgggaggaggccatggagaagctgttccagggttcggatcagaactcggatgctgaccac
acttacctcatgttctctgctaccttccccaagtctgctcgccgattggcgaaagagtat
atggatgaagagtgtgtacgtatcaaggtcggtagggttggcagcacccatcagaacatc
aagcagcagatcatcttcactgaggagagcgccaagagccaggcgctgttcgacttgatc
ttcagtgaaggaccccagcgcaccctggtcttcactaactcgaaggtcaagtgcgacatg
gtggatgactatctgtacaacaagggcttgcctgtcacctccattcactcagaccgtact
cagcgcgagcgcgaggatgctcttcgttccttccgtaccggccgctgccctatcctggtt
gctaccggcgtcactgctcgtggtcttgatgttgccaatgtcaagcatgtcgtcaactac
gaccttccctctaccatgcacgacggtatcaccgagtacatccaccgcatcggccgtacc
gcgcgcatcggcaacgagggcaaggccacgtctttctacaatgaccgcaacgaagacctt
ggtccagatctatgcaagattctctgcgagtcgaagcaagagattccaaagtttcttcag
gagcacatgcccgacgaccctaccactatcgattggcatgacggtactgatgacgagtct
gacgacggtctcggtggcggctttggcggtgatgccggtggtttcgacgttgatgctggc
ggctttggcggcggtggcaatgatagtggctttggtggtggtggcttctctgttgatgcc
gacgacaaggtggctgcttgcactgcactcgtgcagattccgcgttttgttcccctctcc
atcctacacatcacgtcgcctaaggggccgcatccatttctcgtagcgctgccaagtcga
agaggcaacctcatctatatctacgtctttgtgccgccaaaaccggtcgatcttgagggc
aatggcgatcaagacaggaaagagactggaaaatggcgtgtgcctgtggtgctggacttt
catggtggaggcttcataatgggatcgccgttggaacaagcgccgtacgcttcaatgatg
tctcgtgagctcggggccgttgtcatcagcgtgtcgtatcgcataggacctttccatcaa
ttccctgcggcaatccacgacgccgaagacgttctatcagccatactcgatacaagtggg
gtttcgaaggccggcaaggtccttagggaggaaattcagcggtactactcgataatacga
tcggatgcgctggaaaacaagaaggaacctactgctccacacgtcgagcactgcgagacc
atcactctcgaccctacacgtcttgcaatctcgggcttctcagcaggaggaaacattgct
ttgaacatggctatatcagtacctccgtgtcccgagcttggaatgtcgaccacactaggg
cctcactcgcgcaccaatggtccggcccctgcggacaccatgtcgcccagattgcccgaa
aaccgcagagccacaatactggacgatcctttcgagtcgtggccatctctcctaccccca
ccccaagcacagcctcgcatgctgccacttctcttgttctacccttcgctagacgcacga
ctactgccacatgagcgtcccatgaagcctctgcccaacgcgctgagacctgacgatcac
catcagcagaagccgaaagcaccaggactgttttcaatcatgggtccaacatatctcccg
cgcaagctgcgaccacatccacgagcgagccccggcttgaacgatcctgtacacatccag
aaaaacgctgccatcctcctcgtcttgcctgaaaaggatagcttagcagtacaaagcgat
gtatgggtagacaagatgaacaacaatgattggaatggtcctgtgcgctttggcgacgga
cgagagggcgattgggacggacaccggggcggacaagctggatcttccaacgtgcctagc
acgcagaacggaggcatggaagtttggcacgcgcccggttgcagacatggctggacacag
tttccagatacgtttgtgcctcagcatgagcgcaacgagagagaactggtgtttgcgagg
acattggactttgtcagagacaattggaagaaggagctgcgagtggaggggagacaacta
gggaatcagattcaagagttgaggccgttgagcatacccagttcgaacgagtag
DBGET
integrated database retrieval system
