Alternaria alternata: CC77DRAFT_1037140
Help
Entry
CC77DRAFT_1037140 CDS
T05291
Name
(RefSeq) DNA mismatch repair protein MutS
KO
K08737
DNA mismatch repair protein MSH6
Organism
aalt
Alternaria alternata
Pathway
aalt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CC77DRAFT_1037140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalt03400
]
CC77DRAFT_1037140
DNA repair and recombination proteins [BR:
aalt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CC77DRAFT_1037140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_23
AAA_29
AAA_27
AAA_21
Motif
Other DBs
NCBI-GeneID:
29112637
NCBI-ProteinID:
XP_018391964
JGI:
1037140
UniProt:
A0A177E3J9
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MARGVEGNEMSTPRASQKKQPASASQSANGQKSILGFFQKKSTNSPSPAPSDATPVNKTP
TSKLAKKAFNDPPAAITPVPSSDAPDYSSPIKQEHELTIGRGRNKENEPADVTPSSPTRK
ARKPVNYAESDDEEEDVLGPIANNARGRATKRQRVVVDDDSDDEFGLDAATQKAMLEEED
EDDLEDFVVADDSDEEVVSKKRKRSAAPKSRVRSAPASSPPIIEAKDDEEDGDVVMTSTS
TAQQWIYDPENPMVFKPRTSIQATKKDPSKKTKERPSASEPETRYSWLAHQMDADRHPVD
HPDYDPRTLYIPPGAWGKFSAFETQYWEIKSKWWDTVVFFKKGKFYELYEKDASIGHQLF
DLKLTDRVNMRMVGVPEASLDMWATQFVAAGHKVARVDQMESALGKEMRERDDKGKTPKK
AGKENKVIRRELATVLTSGTLVDTGMLQSEMSTYCMAIKEIDRNNLPAFGIAFVDTATAQ
FQLCEFTDDVDMTKFETLIAQMRPGELLLEKSCISAKVLRILKNNTPPTTIWNYLKPNKE
FWPADITIRELEANNYFESPTEDNIEAWPPVLREAREQELVMSSFGALLQYLRSLMIERD
LVTLGNFQWYDPIRKATSLVLDGQSLINLEIFANTFDGSTEGTLFAMLNRCITPFGKRLL
RQWVCHPLADATKINARLDAVDALNADSTIMENFSASLSKLPDLERLISRVHAGRCRAQD
FLKVLEGFEQIEYTISLLKQFGEGEGLIGQLISSMPDLAASLAKWNSAFDRDIARKEGLL
IPEPGIEEDFDNSQQEIDTCKANLDVLLKKVRKELNSNAVQYNDIGKEIYQLEVPKKVKV
PNSWDQMSATAKVTRYYTPELRKLVRALQEAQETHGQITREVATRFCQRFDEDYKVWLAA
VKIIAQLDCLISLAKASASLGEPSCRPVFEDGNRTVVEFEELRHPCMLNTVDDFIPNDIR
LGGDSANISLLTGANAAGKSTILRMTCIAVILAQVGCYLPCTSARLTPVDRIMSRLGAND
NIFAAQSTFFVELSETQKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHDISSRVGC
VGFFATHYRSLAKEFEFHPEVENKRMRIHVDDASKSITFLYKLEQGVAEGSFGMHCAAMC
GIPNKVIENAEKAAREWEHTSRLGERMEVNKDEGGVYVPLGLQSDVAWTLREGLEGVGDR
ALDVLLEAISAL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcggcgtcgaaggaaatgagatgtcaacgcctcgcgcttcacaaaagaagcag
cccgcctccgcgtcgcaatcggcaaatggccaaaagtccattttgggtttcttccaaaag
aagtctaccaactcaccaagccccgcgccatccgatgccacaccggtcaacaagactcca
acatcaaaattggccaagaaggcgttcaatgatccgcccgcagccatcacacctgtgccg
agcagcgatgcccccgactactcgagtcccatcaaacaagaacatgagttgacaatagga
agaggaaggaacaaggagaatgagcccgcagatgtcactcccagtagcccaacacgcaag
gcacgaaagccggtcaactatgccgaatccgatgacgaagaagaggacgtattaggtcca
attgcgaacaatgctagaggcagagcgacgaagcgccagcgggtcgttgtcgacgacgat
tcagacgacgaattcggattagacgcggccacacagaaggctatgcttgaggaagaagac
gaggacgacttggaagacttcgttgttgcagatgattctgacgaggaggttgtatcgaag
aaacgcaaacgttcagcagcgcctaagagtcgtgtcaggtcagctcccgcatcatcaccg
cctataatcgaggcaaaggacgatgaagaagatggagacgttgtaatgactagcacgtcg
actgcacaacaatggatctacgatcccgagaacccgatggtcttcaagccccgcacgtcc
atacaagcgaccaagaaggaccccagtaagaagacgaaagagcgaccaagcgcatcagag
cctgagacgagatattcatggctcgcgcaccaaatggacgctgatcggcatccagtcgat
cacccagactacgacccccgtacactttatatccctccgggcgcttggggcaagttctca
gctttcgagacgcaatattgggagatcaagagcaagtggtgggataccgttgtcttcttc
aagaaaggcaaattttacgagctctacgagaaggacgcctcgattggccaccagctcttc
gacctcaagctgactgatcgggtcaacatgaggatggtgggtgtaccagaagcttcgctg
gacatgtgggcaacacagtttgtagcggcaggacacaaagttgccagagtcgaccagatg
gagtcggctttgggcaaagagatgcgggaacgcgacgacaagggcaaaactccgaagaaa
gctggcaaagagaacaaagtgattcgaagagagctcgctacagtactcacatccggtaca
cttgtggacacaggcatgcttcaaagcgaaatgtccacatattgtatggctatcaaggag
atcgaccgcaataacctgccagcgttcggaatagcgttcgtcgacactgctactgctcaa
ttccaactctgcgagttcaccgacgatgtcgacatgacgaagttcgaaaccctcattgcg
cagatgagacctggcgagttactcctggaaaagtcttgtatatctgcgaaagttctacga
atactcaagaataatactccacccacaacgatctggaactacctgaagcctaacaaggag
ttttggccagcggatatcaccattcgcgaattggaagcgaacaactattttgagtcacct
acagaagacaatattgaggcttggccgccagttctccgcgaagctcgagagcaagaactg
gtcatgtcatcattcggtgctcttctacaatacctgcggtcgttgatgatcgagcgcgat
cttgtcacacttggaaacttccaatggtacgaccccatacggaaggctaccagtctggtt
cttgatggtcaaagcttgattaatctggagatattcgccaacacattcgacggatcaact
gaaggcactttgttcgccatgctcaatcgctgcattactccgttcggcaagcgattactc
aggcaatgggtatgccaccctcttgcagatgcgaccaagatcaacgcacgtttggacgcc
gtggatgcactgaacgccgactctaccatcatggagaatttcagcgcgtctctcagtaaa
ttgccagatcttgaacgtctcatctctcgcgtacatgcgggccgatgtagggcgcaggac
tttctcaaagtattggaaggctttgagcagatcgagtatactattagcttgttgaagcaa
ttcggcgaaggcgagggtcttatcggacaactcatctcctcgatgcctgatttggctgca
tcactggcaaaatggaactcagcctttgatcgagacatcgcccggaaagaaggacttctc
attcctgagcctggcatcgaagaggactttgataacagccagcaggagatcgacacttgc
aaagctaatttggatgtactgctgaagaaggttcgaaaagagctcaactcaaacgctgtt
caatataacgacatcggcaaggagatctaccagctggaggtgcccaagaaggtcaaagtt
cccaacagctgggaccaaatgtcagctactgccaaggtcactcgatactacacacctgag
cttcgaaagctagtacgagcactacaagaagcacaggagacgcatggccagatcacccgt
gaagttgctactcgcttttgccaacgcttcgacgaggactacaaagtctggctcgcggcc
gtcaagatcattgctcagctagattgcttgatcagtcttgcgaaagcatctgcttcactc
ggagagcctagctgccgtcctgttttcgaagatggcaaccgtactgtcgttgagtttgaa
gaactccgccacccgtgcatgctcaatacagtcgacgacttcatccccaacgatatcagg
ctaggcggcgactctgccaacatcagtctgctcactggtgcaaacgcagcgggtaaatct
accatccttcgcatgacttgtatcgcggtcatcctcgcacaagtgggatgttacctacct
tgtacatcggccagactcacaccagtcgatcgcatcatgtcccgtctcggcgccaacgac
aacatctttgctgcccagtctaccttctttgttgagctctctgaaacacagaagatcctt
tcggaagctacacctcgctctcttgtcatcctcgacgagctcggtcgtggaacatcttct
tacgatggtgttgcggttgcccaagctgttttgcacgatatcagttcacgtgtaggctgc
gtcggtttcttcgccacccactaccgatctttggccaaggaattcgagttccaccctgag
gtcgagaacaagcgtatgcgtatccacgtcgacgatgcatccaagtccatcaccttcctc
tacaaactggagcagggtgtggctgaaggtagttttggtatgcactgtgcagccatgtgt
ggcattccgaacaaagtcattgagaatgcagagaaggcggctagggaatgggagcacact
agtaggctgggagagagaatggaggtcaataaggatgagggcggcgtgtatgtaccactg
ggtctgcagagtgacgttgcttggacgctgagggaaggcttggagggagtcggtgatcgg
gcgctggatgtgctgctcgaggctatctccgcgctataa
DBGET
integrated database retrieval system
