Alternaria alternata: CC77DRAFT_1038627
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Entry
CC77DRAFT_1038627 CDS
T05291
Name
(RefSeq) WD40 repeat-like protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
aalt
Alternaria alternata
Pathway
aalt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CC77DRAFT_1038627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aalt03009
]
CC77DRAFT_1038627
Ribosome biogenesis [BR:
aalt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CC77DRAFT_1038627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SCAP
WD_LRWD1
Beta-prop_NWD2_C
DUF6476
Motif
Other DBs
NCBI-GeneID:
29112717
NCBI-ProteinID:
XP_018388444
JGI:
1038627
UniProt:
A0A177DTE8
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MAAEVQLLQPLKLPKGPSTLTSEQKYWNSFASELRLDPSQHSSPVTHISIPPPQPANALS
AAQDLFAVTTGSRVQIFSSKSRKVVKTISRFGVDDIAHSGNIRRDGRILVAGGDTGVIQA
FDVKSRAILKTWKEHKQPVWVTQWNPTDLTGLMSCSDDRTVRLWDLPSEKSVMKFDGHQD
YVRSGTFMPAQSGLLVSGSYDQTVRLWDSRVGGKAVMVFKHAAPVETVLPMPSGTAVLAA
ADNVISVLDIVAAKPIHMLRNHQKTVTALSLANNGERLLSGALDGHVKVFETTGWNVVGG
MKYPSPILSLSVIPNQKEDRHIAVGMQSGLLSIKTHLSGEQKVQAREREKEMKALMEGKI
EEYDRSKKRKRGKGWEKRIRGKDFTGESADIVIEGNARGKITAGQPWAHALRKGMYSQAL
DMVLESKDANARSQSLTLLTALRHRSTLRTALSNRDSVTLQPILRWCIKNISDYRITRLT
TDVALVVLDLYADQLGRSEEVDDLIMALMQRVKVTVEASQDAWKVRGMLDMLVSSVGATE
GVEA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgaagtacaactcctgcagcctttaaagctgccaaagggcccttcgactctc
acgtcggagcaaaagtactggaactcgttcgcctcagagctgcgcctcgacccgtcgcag
cattcgtcgcccgtaacccatatctcgataccgcctcctcagcccgcaaatgcgctatct
gccgcccaggatcttttcgccgtgacgacaggatcccgtgttcagatcttctcctctaag
agccgaaaggtcgtcaagacgatatcgcgcttcggcgtcgacgacattgcgcattcagga
aacatacggcgcgatggcaggatcttggtcgcaggaggcgacactggtgttatacaggcc
tttgatgtgaagagcagggcgattttgaagacatggaaggaacacaagcagcctgtctgg
gtgacacagtggaatccaaccgacctcacgggtctgatgagttgttccgacgataggact
gtgcgactatgggatctgccgagtgagaagagtgtgatgaagtttgatgggcatcaggat
tacgtgcgcagcggtacattcatgcctgcgcagagtgggctacttgtctccggaagttac
gatcaaacggtacgactctgggattcgcgagtgggcggaaaggcggtcatggtattcaag
catgccgcgcccgtcgagaccgttctacccatgccctctggtactgctgtcctcgcagca
gccgacaacgtgatcagcgtgctcgacattgtagctgcgaagccgattcatatgttgcgc
aaccaccagaagacggttaccgcgctctcgttggcgaacaatggcgagcgtcttctctct
ggtgcccttgatggccatgtcaaagttttcgaaacaactggctggaatgtagtgggagga
atgaagtacccctctcccatcctgtcgctcagcgttattccgaaccagaaggaggatcgg
cacatcgccgtgggcatgcagtctggtctgctctcaatcaagacccatctctcaggcgag
cagaaggtgcaggctcgtgaaagggagaaggaaatgaaagctctcatggagggcaagatt
gaggagtacgacaggagcaagaagcggaagcgcgggaagggctgggagaagcgcatacga
ggcaaagacttcacaggcgaaagcgcagatatagtcattgaaggcaatgcgcggggaaag
attactgccggacagccttgggcgcatgcgttgcgaaagggcatgtattcgcaggcgttg
gacatggtacttgaatcaaaggatgcgaacgcgcgcagtcagtctctcacgctcctgacc
gctctacgtcaccgctctactcttcgcaccgcccttagcaatcgtgactcggtaacactc
cagcccattctccgctggtgcataaagaacatatccgactatcgtatcacacgtctgacg
acagacgttgcgctcgtagtactggatctttatgccgaccaactaggcagaagcgaagag
gtcgacgatctgatcatggcgcttatgcaacgtgtcaaggtgacggttgaagcaagtcaa
gatgcttggaaagtgaggggtatgttggatatgctcgtcagcagtgtgggcgcaacagag
ggtgtggaagcatga
DBGET
integrated database retrieval system