KEGG   Alternaria alternata: CC77DRAFT_1039199
Entry
CC77DRAFT_1039199 CDS       T05291                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K10752  histone-binding protein RBBP4
Organism
aalt  Alternaria alternata
Pathway
aalt03082  ATP-dependent chromatin remodeling
aalt03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CC77DRAFT_1039199
   03083 Polycomb repressive complex
    CC77DRAFT_1039199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aalt03036]
    CC77DRAFT_1039199
Chromosome and associated proteins [BR:aalt03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     CC77DRAFT_1039199
  Histone modification proteins
   HAT complexes
    HATB complex
     CC77DRAFT_1039199
   HDAC complexes
    Sin3A-HDAC complex
     CC77DRAFT_1039199
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     CC77DRAFT_1039199
    PRC2.2
     CC77DRAFT_1039199
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     CC77DRAFT_1039199
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CC77DRAFT_1039199
  Chromatin remodeling factors
   NuRD complex
    CC77DRAFT_1039199
   NuRF complex
    CC77DRAFT_1039199
   NuRF complex (fruit fly)
    CC77DRAFT_1039199
SSDB
Motif
Pfam: WD40_Prp19 CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st MIOS_WD40 Beta-prop_IFT122_1st ANAPC4_WD40 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 29112744
NCBI-ProteinID: XP_018388101
JGI: 1039199
UniProt: A0A177DTW7
LinkDB
Position
Unknown
AA seq 433 aa
MDETMSDAHDSHEMDDQEQLEQKLINEEYKIWKKNSVFLYDMLYGRALEWPTLTTQWLPD
KKPVEGTNMSQHRVILGTHTSNQAQNYLQIAHCEIPDFRVPDLSELNEERGEIGGHGNAK
RPFDFKIVQKINHPGEVNKARYQPQNPDIIASLCVDGKVLIFDRTKHPLQPKDDSIKFEA
ELVGHSKEGFGLSWSPLKEGHLVTGNEDTTVKTWDIKSGFSKSNKTISPTATYNVHSATV
NDVQYHPIHNFLIGTASDDLTWQIIDTRMETHKKALYRKEAHDDAVNCISFHPEFEGTFA
TGSADKSVGIWDMRNFDKKLHSLQNHASDVIGLQWHPQDAAILASSSYDRRICLWDLSKI
GSEQTAEEAEDGPPELLFMHGGFTNRICDFDWNKNDPWLMMGAAEDNQLQIFRPARKLVE
PIKKTVNHGDVSD
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggacgagactatgagtgacgctcacgattcccacgagatggacgaccaagagcagttg
gagcagaagctcatcaacgaagagtacaagatatggaagaagaacagcgtctttttatac
gatatgctgtacggccgcgcgctcgagtggcctacgctcactacacaatggcttcccgac
aagaagcctgtagaaggcaccaacatgagccagcaccgcgtcattcttggaacccacacg
tcgaaccaagcccaaaactacctacaaatcgcccactgcgagatacccgacttccgggtt
ccagacttgtcagagcttaacgaagagcgcggagaaatcggcggccacggcaatgcgaag
cgaccctttgacttcaagattgtgcagaagatcaaccaccctggcgaggtcaacaaggcg
cgctaccagcctcagaaccccgacatcatagcatcgctgtgtgtagacggcaaggtgctc
atcttcgaccggaccaagcacccgctgcaaccaaaggacgattcgatcaagttcgaggcc
gagcttgtaggccatagcaaggagggatttggcttgagctggagtcctctgaaagaggga
cacttggtgacgggtaacgaggataccacagtgaagacttgggacatcaagagtggcttc
tccaagagcaacaagaccatcagtccaacggcgacatacaacgttcacagtgcaaccgtc
aacgatgttcaataccacccgatccacaacttcctcattggtaccgcgtccgacgatctt
acttggcaaatcatcgatactcgtatggaaacacacaagaaggcactgtacaggaaggag
gcccacgacgacgcagtcaactgcatctcgttccatcccgagtttgaagggactttcgcg
acaggctcggcagacaaatcagtcggaatctgggatatgaggaattttgacaagaagctt
cacagcctgcaaaatcacgcctcagatgtcattggtctgcaatggcacccgcaagatgct
gccattcttgccagttccagttacgatcgccgtatttgcctgtgggatctcagcaagatc
ggttctgaacagacggctgaggaagcagaagatggcccccctgaactactgttcatgcac
ggtggcttcacgaaccgaatctgcgactttgactggaacaagaacgatccatggctcatg
atgggcgctgcagaggacaaccagctgcaaatcttccgtcccgcgcgcaaactcgttgag
ccaatcaagaagactgtaaaccacggagatgtctcagactga

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