Alternaria alternata: CC77DRAFT_1056869
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Entry
CC77DRAFT_1056869 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aalt
Alternaria alternata
Pathway
aalt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC77DRAFT_1056869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_1056869
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CC77DRAFT_1056869
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CC77DRAFT_1056869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
WKF
GP3_package
DUF948
Chal_sti_synt_C
EAD9
CorA
Motif
Other DBs
NCBI-GeneID:
29113545
NCBI-ProteinID:
XP_018390486
JGI:
1056869
UniProt:
A0A177DZB1
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MAARKLQQEIDKCFKKVAEGVATFENIYEKIMQTGNPSQKEKLEDQLKKEIKKLQRSRDQ
IKTWAAMSEIKDKKPLLDHRKLIETQMERFKAVEKEMKTKAYSKEGLQLASKIDPKDKEK
MEMVEFLQQMNEELERQIETIEAEIETLHANVKKTKKGDNSKAERIAELEESVERNKWHQ
SKLDLLHRALENGNVETEQVKGIEDGIKYYVESNQDPDFADDDTMYDDFNLQEEEAIFGL
GEGLDQVSSHESQSVADNDESDIRPPAPKPKATEAVQQAARRPSTQMKSPLPALATLHTP
LPGASNTTGNAMKPAPIPTRTTGEPLKYASAAAAAAASDKNGVGIAPLPPPPGAAAAQSG
LAPGARASATSSPAITHSQPAARTQPAESAQASPAPAASIPATPAVEKETLSRAASSEDA
SKSSRRTPAPEPVEEEESSAATPPLTNGESHAEDDEEESVYHLPSSLQDLLDSFEATKND
ISASATKPPDERMLAASMATAPDSADTEAPRHYRPQNPYPFTPAHYPQEPLPIFDDPRLY
SRIETDALFYAFYYRQGTYQQYLAAKALKSQSWRFHKQYQTWFQRHEEPKAITEDYEQGT
YRFFDYESTWMNRRKADFRFAYKFLEDEL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacggaaactccagcaggagattgacaaatgcttcaagaaagtcgcagaaggc
gtcgcgacgtttgagaacatatacgagaagataatgcaaacgggcaatccctcgcagaag
gagaagctcgaagaccagctgaagaaggagatcaagaagctgcagcggtcgcgggaccag
attaagacgtgggccgccatgtccgagatcaaggacaagaagccgctgctggaccaccgg
aagctcatcgagacacaaatggagcgcttcaaggccgtcgaaaaggagatgaagacgaaa
gcatactccaaagaggggctgcaattagcgtccaagatcgaccccaaggacaaggagaag
atggagatggttgagttcctgcagcaaatgaacgaggagctggagcggcaaatagagacc
atcgaggccgaaatcgagacgctgcatgccaacgtaaagaagacgaagaagggagacaac
tccaaggcggagcggatagcagagctggaagagtcggtcgagcgaaataagtggcatcag
tccaagctggatctgctgcatcgagcgctcgagaacggcaacgtcgagacagagcaggtc
aaggggatcgaagacggcatcaagtactacgtggaaagcaaccaggaccctgactttgcc
gacgacgacacaatgtacgacgacttcaacctgcaagaggaggaggccatcttcggcttg
ggcgaaggcctcgaccaggtctcatcgcacgaatcgcagtcggtagcagataatgacgag
tcggacatacgaccaccagcgccaaagccaaaagcgacagaagctgtgcaacaagcagcg
agacggccctcgacacagatgaagtcgccattaccagcactagcaacgctgcacacgccc
ttgcctggtgcctcaaataccacgggcaacgccatgaagcccgcgccgatacccacacgg
acgacgggtgagcctttgaagtacgcctcggccgccgccgctgcagctgcgagtgataaa
aatggagtgggcattgcccctttgccaccaccaccgggagctgccgcggcacagtcaggc
cttgctcctggcgcacgcgcaagtgctacgagttccccagccataacacattcccaacca
gccgcacgcacacagccagccgaatccgcacaagcatcgccagctcctgcggcaagtata
cccgctacgcctgctgtcgagaaggagacgctttcgcgcgctgcttcgtcggaagatgct
tcaaagtccagcagaagaacaccggctcctgaacctgtagaagaagaagagtcctcggct
gctactccgccgttaacaaatggtgaatcccatgctgaagacgacgaggaagagtcagta
tatcaccttccttcaagcttacaggatctcctggattccttcgaagcgactaagaatgac
atatccgcctctgcaacaaaacctcctgatgagcgcatgctagcagcatccatggctacc
gcgccggactctgccgacactgaggcgccccgccactaccgtccccagaatccctatccg
tttacgcccgcgcactacccgcaagagccgttaccaatcttcgatgatcctcgcctatac
tcccggatcgagaccgacgctctcttctatgccttctactatcgccaaggtacataccag
cagtatctggcagcgaaagcactcaagtcgcaaagctggagattccacaagcagtatcaa
acatggttccaacgacacgaagagccaaaggcgataacagaagactacgagcaggggacg
tatagattcttcgactacgagtcgacatggatgaatcgaaggaaagcagacttccgattt
gcctacaagttcttggaagatgagctatga
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integrated database retrieval system
