KEGG   Alternaria alternata: CC77DRAFT_1063912
Entry
CC77DRAFT_1063912 CDS       T05291                                 
Name
(RefSeq) small nuclear ribonucleo protein Sm D2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
aalt  Alternaria alternata
Pathway
aalt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC77DRAFT_1063912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aalt03041]
    CC77DRAFT_1063912
   03032 DNA replication proteins [BR:aalt03032]
    CC77DRAFT_1063912
Spliceosome [BR:aalt03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CC77DRAFT_1063912
  U2 snRNP components
    CC77DRAFT_1063912
 Complex B
  U1 snRNP components
    CC77DRAFT_1063912
  U4/U6.U5 tri-snRNP components
    CC77DRAFT_1063912
 Complex C
  U2 snRNP components
    CC77DRAFT_1063912
DNA replication proteins [BR:aalt03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CC77DRAFT_1063912
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 29114270
NCBI-ProteinID: XP_018383347
JGI: 1063912
UniProt: A0A177DEM5
LinkDB
Position
Unknown
AA seq 117 aa
MVDAKIQELLSKPRSELTEYEVAQVEEHELTTGPLSILQTAVRSRTQVLISCRNNRKILA
RVKAFDRHCNMVLENAKEMWTETPRLANGSYGRKVNKDRFISKLFLRGDSVILVLLS
NT seq 354 nt   +upstreamnt  +downstreamnt
atggtggacgcaaagattcaagagcttctttccaagccccgttctgagttgaccgagtac
gaagttgcccaggtcgaagaacatgagctcaccaccggtcccctctctatcctccagacc
gccgtccgctcgcgcacacaagtcctaatctcgtgccgaaacaaccgcaagattctcgca
cgtgtgaaggctttcgaccgtcattgcaatatggttctcgagaacgcgaaagagatgtgg
actgagactccccggttagccaacggcagctacggaaggaaggttaacaaggatcgcttc
atctctaagctgttcctacgaggcgactcggtcattcttgttttgctatcataa

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