KEGG   Alternaria alternata: CC77DRAFT_1067601
Entry
CC77DRAFT_1067601 CDS       T05291                                 
Name
(RefSeq) small nuclear ribonucleo protein F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
aalt  Alternaria alternata
Pathway
aalt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC77DRAFT_1067601
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aalt03019]
    CC77DRAFT_1067601
   03041 Spliceosome [BR:aalt03041]
    CC77DRAFT_1067601
   03032 DNA replication proteins [BR:aalt03032]
    CC77DRAFT_1067601
Messenger RNA biogenesis [BR:aalt03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     CC77DRAFT_1067601
Spliceosome [BR:aalt03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CC77DRAFT_1067601
  U2 snRNP components
    CC77DRAFT_1067601
 Complex B
  U1 snRNP components
    CC77DRAFT_1067601
  U4/U6.U5 tri-snRNP components
    CC77DRAFT_1067601
 Complex C
  U2 snRNP components
    CC77DRAFT_1067601
DNA replication proteins [BR:aalt03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CC77DRAFT_1067601
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 29114608
NCBI-ProteinID: XP_018379229
JGI: 1067601
UniProt: A0A177D2Z1
LinkDB
Position
Unknown
AA seq 93 aa
MAAVAPFNPRPLLQSLVDKDIVVRLKWGETEYKGRLVSVDLYMNIQLSNTEEFVGGVSSG
TLGQVLIRCNNVLWIGKAEEVEPKATKDTAMSG
NT seq 282 nt   +upstreamnt  +downstreamnt
atggctgcagtggcacccttcaacccgcgtcctttgctccaaagcttagtcgacaaagac
atcgtcgtcaggttgaagtggggcgagaccgagtacaaaggcagactcgtctccgtcgac
ctctacatgaacatccagctctccaacacggaagaattcgtaggcggcgtcagctcaggc
accctcggccaggtcctcataaggtgcaacaacgttctctggatcggaaaggctgaagag
gtggagcccaaggcgaccaaggacacggccatgagtggttga

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