Alternaria alternata: CC77DRAFT_1097301
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Entry
CC77DRAFT_1097301 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
aalt
Alternaria alternata
Pathway
aalt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CC77DRAFT_1097301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_1097301
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CC77DRAFT_1097301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Nup54_57_C
Motif
Other DBs
NCBI-GeneID:
29115479
NCBI-ProteinID:
XP_018382874
JGI:
1097301
UniProt:
A0A177DCB9
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MSFSFGNTAGGEKKTGTLFGSTTAPAGGLFGQSQQQQPQQSNATQSGGLFGSSTAPQNNN
NTNNNGLFGSTQPQQQNSGSSLFGQPQQQQQQQNAGSSLFGQPQQQQQQQNAGSSLFGQP
QQQQQQQQQGQQQQPNMGNSLFGASLQPAPVLNNVQAQSVQQQREGLPQLRQSSAQPFAG
SAYMTGHREKSVIEQIRILNNKWDPENPECVFQYYFYNSVKPEEAPFYGPSQGEDERKWE
EALSKKPSPGAIPVLARGFEQVGERIKQQAAAVTALRTRLHEINNSLSLLKDAHELTVAS
RITEAKRKHIVFTQRTLALATKVQILRNRGYVMDQPEEDLKKKLIELEKQTFDPVLGGRQ
EEIWARMSGVRERARILQEETEKLGKTIEQQQNGELLTDEDQKALEKLLKDYDRQLEHLK
KWVDDTRDEYDEWETAQQSRPTKR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcagctttggaaacacggctggtggggagaagaagacgggtactctttttgga
agcactacagcaccagctggtggtctgtttggtcaatcgcagcagcaacagccacagcag
tcaaacgcgacacagtctggcggcctcttcgggtcatcgaccgccccccagaataacaac
aacaccaacaacaatggcttgtttggatcaacacaaccacagcagcagaactccggatcg
agcttgtttggccagccgcagcaacagcaacagcagcaaaatgcaggctcgagtctcttt
ggacagcctcagcagcaacagcaacaacaaaacgcgggctccagtctgttcggccaaccc
cagcagcagcagcagcagcaacaacaggggcaacagcaacagccaaacatgggcaacagc
ctattcggcgcctcgttgcagccagcacctgttctcaacaacgtacaggcgcaaagcgtt
cagcaacagcgcgaagggcttccgcagctgcgccagtcttctgcacaaccttttgctggc
tctgcctacatgaccggtcacagagagaagtcggtcatcgagcagatacggattctcaac
aacaagtgggaccccgagaaccctgaatgcgtcttccaatactacttctataactcggtc
aagcccgaagaagcgcccttctacgggccctcgcaaggcgaagacgaacggaaatgggag
gaggctttgtcaaagaagccaagcccaggtgccatccctgtgcttgcccgcggctttgaa
caggttggagaacgcatcaagcaacaagcagctgccgtcaccgcgctccggaccagactg
cacgagatcaacaacagtctgtcacttctcaaagacgcgcacgagctgactgtagcttcg
cgcatcactgaagcaaagcggaagcacatcgttttcacacaacgaacactagcccttgca
accaaggtccagatcctgcgtaaccgaggatacgtcatggatcagccagaggaggacctg
aagaagaagctcatcgagttggagaagcagacgtttgatcccgtacttggcgggcgacaa
gaagagatctgggcgcgtatgtctggtgtgcgcgagcgggcgcgtatccttcaggaggag
accgaaaagctgggcaaaacgattgagcagcaacaaaacggtgaactccttactgatgaa
gaccaaaaggcactagagaagctactcaaagactatgaccgacaactcgagcacctcaag
aagtgggtcgacgacactagagacgagtacgatgaatgggagacggcgcagcaatcaagg
ccgacaaagcgataa
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integrated database retrieval system
