KEGG   Alternaria alternata: CC77DRAFT_250219
Entry
CC77DRAFT_250219  CDS       T05291                                 
Name
(RefSeq) Spt4-domain-containing protein
  KO
K15171  transcription elongation factor SPT4
Organism
aalt  Alternaria alternata
Pathway
aalt03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CC77DRAFT_250219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aalt03021]
    CC77DRAFT_250219
   03019 Messenger RNA biogenesis [BR:aalt03019]
    CC77DRAFT_250219
Transcription machinery [BR:aalt03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     CC77DRAFT_250219
  RNA polymerase I system
     CC77DRAFT_250219
Messenger RNA biogenesis [BR:aalt03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     CC77DRAFT_250219
SSDB
Motif
Pfam: Spt4
Other DBs
NCBI-GeneID: 29116461
NCBI-ProteinID: XP_018382820
JGI: 250219
UniProt: A0A177DF11
LinkDB
Position
Unknown
AA seq 333 aa
MARKGVATVKTPNREDRYMTIDSDGEEVTPAASSPSDRTVSRKNSRADEHQYFAHELENV
DPAASREPLNPSKVAESGPEPERRQPRQASGTVEQSRTLANALFPASFNNPVLPSVEASE
SPTSISAHQTPHRHQEPVQQPRSRLQKSATPSRAAGRGRVNASTDASVSSPIHHLGLTPE
NRHQTGQNSHPSLPSYIDNPNYFDMAQDMIQGGAYIAPGQQRNMRACMVCSIVRTQNQFL
TQGCPNCEEILELAGNPEQINDCTSQVFEGLITVADTSRSWVARYQRLEGYKPGVYATQV
EGILPDDVIGLVESAGINYVPRDGSEQDMLPKD
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcgcgcaaaggtgtcgcaacggtcaagacgcctaacagagaagataggtacatgacc
atcgattctgacggcgaggaggtcactcccgctgccagttctccgagcgatagaactgtt
tctcgaaagaacagcagagcagatgagcatcagtactttgcgcatgagctggagaatgtc
gatcccgcagcctcacgcgagccactaaacccctctaaagtggccgagtcaggtccagag
ccagagcgccgacagcctcgccaagcttccggaaccgtagaacaaagtaggacacttgcg
aacgcactgtttcctgccagcttcaacaaccccgtccttccttctgtcgaagcgtccgag
tcgcccacgtccatatctgcccaccaaactccgcatcggcatcaagagcccgtacagcag
ccccgttctcgacttcagaaatctgctacgccttcgcgcgctgctggtcgaggtcgcgtc
aacgcttctacagacgccagtgtctccagtcccattcaccatctcggtctcacccccgag
aaccgccaccaaacaggtcaaaactcgcatcccagccttccgtcctacatcgacaacccc
aactactttgacatggcacaagacatgattcagggcggcgcgtacatcgcgcctggccag
cagcgcaacatgcgcgcctgcatggtctgctccatcgtccggactcagaaccagttcctc
acccaaggctgcccgaattgcgaagagattctcgaactcgccggcaaccccgagcagatc
aacgattgcacatcgcaagtctttgaaggcctcattacggttgctgacacctcaaggagt
tgggtagctagataccagcgccttgagggctacaagccaggtgtctacgcgacccaggtt
gaaggcattctcccagacgacgtgattggcctggtggagagtgcaggcatcaactacgtg
cctagggatggtagcgagcaggatatgctaccaaaggactaa

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