Alternaria alternata: CC77DRAFT_335184
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Entry
CC77DRAFT_335184 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aalt
Alternaria alternata
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CC77DRAFT_335184
Enzymes [BR:
aalt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CC77DRAFT_335184
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
29116893
NCBI-ProteinID:
XP_018390990
JGI:
335184
UniProt:
A0A177E3K9
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MRFLPTITALFLAPTAVFAAWGYTDDGKNYVIDTNANLVVKVSKTNGDMTSIKYRGIEYN
GQNGKNSHVESGLAPGTVTIKQYTTPANIIKVTMKVGTLIHTLVFRYGNPNVYIFMNKKD
TSITVSRYILRIPPNIFTNNVNEDTDWIPDGAPAIESGDINGLNGQTWSKHYSGKKYGRT
MDYDWVGYTNSNVGMYMIRSNHEKASGGPFFRSLVRRGGSGGPDLYDIYHYNMGHTDVMR
FGLQGPSVLHFTDGGAAPNTALFARNANWDWFDALEIDGWTPASKRGAVSGVGLANVKSG
YQYVVGLKSAQAQYWATAGTGTWKISKVLPGSYTLNVYKGELEVHTSTVTITAGGTVALN
TITCSDPSDTSAIWRIGEWDGTPKGFLNFGDSPMKPTYMHPSDSRLAKWDTGNYIIGTST
SANFPGYIWKDINNDHIVYFRLTDAQLANGAKIRIGVTEGSAGGRPTIVMNSWSAPLQAD
KGQGDTRSLTVGTYRGNNYVYEFNVPASAWVNSAREYQLLKISVISGKTSTGYLSPGMSV
DAIDMVAA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttttaccgactatcactgctctttttcttgcgccgactgctgtcttcgcagcg
tggggctacaccgacgacggcaagaactatgtgatcgacacgaatgcaaatctcgtagtc
aaggtcagcaagacgaacggggacatgacatcgatcaagtaccgcggcatcgaatacaat
ggtcagaatggtaaaaactcgcatgtggaatctggtctcgcacctggaactgtcaccatc
aagcaatacaccactccagccaacatcatcaaggtgacgatgaaagttggcactctcatc
catactttggtctttcgctatggcaatcccaacgtatacatatttatgaacaagaaagac
accagcatcactgtgtcaagatacattcttcgcattcctccgaacatattcaccaacaat
gttaacgaggacactgactggattccagatggcgctccggccatcgaatctggtgatatc
aatggtctaaatggccagacgtggtccaaacattactctggcaagaaatacggtcgcaca
atggactatgactgggtcggatatacgaacagcaatgttggcatgtatatgattcgttcg
aatcatgagaaggcgtcaggaggcccattcttccgaagcttagtacgccgcgggggtagt
ggtgggccggatctatatgatatctatcactacaacatgggtcataccgatgtgatgcgc
ttcggcctccaaggtccatccgtccttcacttcactgatggtggtgctgcaccaaacact
gctctattcgcgcgcaatgccaactgggattggtttgatgccctcgagattgatggctgg
accccggctagcaagcgcggcgctgtctctggtgttggtctggcgaatgtgaagagcggg
taccagtatgttgtaggcctgaagagtgcccaggctcagtactgggctactgcaggaacc
ggcacctggaagatcagcaaggtcttgccaggctcatacactttgaatgtatacaagggt
gagctcgaagttcataccagcactgtcaccattactgctggaggaaccgtggcgctgaac
acaatcacctgcagtgacccttcagatacatccgccatatggcggattggtgaatgggat
ggcacacccaaaggatttctcaatttcggtgacagccccatgaagccgacatacatgcat
ccgtctgattcgcggcttgcaaagtgggacacaggaaactatatcataggtaccagtacc
agcgcgaactttccgggctacatctggaaggatatcaacaacgatcacatcgtgtacttc
cgcctcactgatgcgcaattggccaatggtgcaaagatcaggatcggtgtcacagagggt
tctgcaggtggacgaccaactattgtgatgaacagttggagtgctcctttgcaggctgat
aagggccagggggacactagaagtctgactgttggaacgtatcgcggcaataattacgtc
tatgagttcaatgtcccagcaagtgcttgggtgaacagtgctagggaataccagctgctg
aagatctctgtgatctctgggaaaacttctactggctacttgagtccgggaatgagtgtc
gatgcgatcgacatggtcgcagcctag
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integrated database retrieval system
