Alternaria alternata: CC77DRAFT_488624
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Entry
CC77DRAFT_488624 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
aalt
Alternaria alternata
Pathway
aalt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CC77DRAFT_488624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_488624
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CC77DRAFT_488624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
NET2A
BRE1
hDGE_amylase
Peptidase_S64
OmpH
WXG100
DUF7036
DUF3450
Motif
Other DBs
NCBI-GeneID:
29117486
NCBI-ProteinID:
XP_018380449
JGI:
488624
UniProt:
A0A177D6K2
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MSFTFGQQGNNNNNNNNGGSSNTPNKSLFGAAPSTGSATPSLFGTANSNTSSTPASGGLF
GSAGANTGGSGGLFGGASSTPASKPGGLFGGGGATPAASSTPAFGGGFGFGKKEGDAPKP
AGGLFGRAATGAPTTSSAPSFGFGNAGGSTSTATPATNKTSLLPSTTPAGAPPGGSLFGQ
NTQASGGTSSLFGGAKPAAPAATTSSSTPSLFGATPAAKPSGGFSLGGNTGTSTDANKSA
ASASNLFGGGNQSTPTSQDTQASKPAGGLFGGLGSTTPSSTPAKPLGGFSVGATPAQPAS
SQASSTPASGLSLGGNNTASSASATPSLFSPAGASTPASTGGGFSFAKPAAPASTAATTG
ATTTATSGAPTTTASSSSSLFPSIGGGLGGGSASSAAPATAATTTSGTTPSLFNKPAASE
APAASSNTASQPTPSLGATTGNNAAQSGLAASTAGPAPSAQSRLKNKSMDEIITRWAADL
SKYQKEFQSQAETVASWDRALVENSDKVRQLYSKTFQAERDAAEVERQLTMMEENQQELD
SYLDRYEKEIDNLMKMHGVSGKNETLRGPDQERERTYKLAEKLQDRLNELNKDLTEMIEE
INNTSQTLSKTGKPDDPLTKVVRVLNTQLAQLQLIDSGASQLQEKITKAQRETQRVGANG
WNGLGSDPSADFMNSMRGARASQRF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcacattcggccagcaaggcaacaacaacaacaacaacaacaacggcggcagc
agcaacacaccaaacaaatcgctgtttggtgccgcgccttccacgggcagcgcgacgcca
tccctcttcggaaccgcgaacagcaacacctcgagcacgccggccagcggtggcctcttt
ggctctgctggcgccaacacaggcggctcaggtggtcttttcggcggcgcatcgagcacg
cctgcgtcaaagcctggcggtttgttcggcggaggcggagccacacctgccgcgtcctca
acaccagcttttggcggaggctttggtttcggcaagaaggagggcgatgcgccaaaacca
gctggaggtctgtttggaagagcggccactggcgcaccaacaacgtcttctgcgccctca
tttggatttggtaacgcgggtggttcgacatcaacagctacgcctgcaacgaacaagacg
tcgctccttccttccactaccccagctggtgcccctccgggtggaagcctgtttggacag
aacacccaggctagtggaggcacatcctctttgttcggcggcgcaaagccagcagctcca
gcagcaaccacatcgtcctccacacctagcctgttcggcgctacccccgctgcaaagccc
tcgggcggcttcagcttaggaggaaacaccggcacctcgaccgacgcgaacaagtccgcg
gcttctgccagcaacctttttggaggcggaaatcagtcgacccctacttctcaagacaca
caggcttctaagcctgcgggtggcctctttggtggactgggcagcacaaccccctcctcg
acacccgcgaaacctctaggagggttcagtgtgggtgccacacctgcacagccagcttcc
tcgcaggcttcttctactccagcctcgggcttgagcctaggcggaaacaacactgcgtcg
tctgcttctgcaacacctagtctgttctcgcctgcaggagcttccacaccagcatctacg
ggtggtggtttcagctttgctaaacctgctgcgcctgccagcacggctgcaactaccggg
gctacaaccactgccacaagcggtgcacccaccacaaccgcatcatcgagctcgtccttg
ttccccagcatcggaggtgggctgggaggcgggagtgcttcgtccgctgctcctgcgact
gccgccaccaccacttctggcaccacacccagtttatttaacaagcctgcagcaagtgaa
gcaccagcagcatcgtctaacactgcttcgcaaccaactccttccctcggggccacgacc
ggaaacaatgctgcccaaagcggacttgctgcgtcaactgccgggcctgcaccatcggct
caatcacgattgaagaacaagtctatggacgagatcatcacacgctgggcagctgacctc
tccaagtaccagaaagaattccaatcacaggctgagacagtcgcctcatgggatagggcc
ttggttgagaattccgataaagtccgacaactgtactcgaagactttccaagctgagcgt
gacgctgctgaagtcgagaggcagctgacgatgatggaggagaaccagcaggagctcgat
tcctacctagatcgatacgagaaggagattgacaatctcatgaagatgcacggcgtcagt
ggcaagaacgagaccctacgcggccccgaccaggagcgcgagaggacttacaagcttgcc
gagaagcttcaagaccgcctcaacgagctcaacaaggatctcacagagatgattgaggag
attaacaatacctcgcagacgctcagcaagacaggcaagccagacgatcctcttaccaag
gtcgttcgtgttctcaacacccagcttgcacagcttcaactcatcgattccggtgcttcg
cagcttcaggagaagattaccaaggcgcagcgggagacacaacgtgttggtgccaacggc
tggaacggacttggctcggatccttcagccgatttcatgaacagcatgcgtggggcgagg
gcttcgcaaagattttaa
DBGET
integrated database retrieval system
