Alternaria alternata: CC77DRAFT_671236 Help Entry CC77DRAFT_671236  CDS       T05291                                  Name (RefSeq) Prp19-domain-containing protein   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism aalt  Alternaria alternata Pathway aalt03040   Spliceosome aalt04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:aalt00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CC77DRAFT_671236   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     CC77DRAFT_671236  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:aalt03041]     CC77DRAFT_671236    04121 Ubiquitin system [BR:aalt04121]     CC77DRAFT_671236    03400 DNA repair and recombination proteins [BR:aalt03400]     CC77DRAFT_671236 Enzymes [BR:aalt01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      CC77DRAFT_671236 Spliceosome [BR:aalt03041]  Complex B   Other components    Prp19 complex     CC77DRAFT_671236  Complex C    Prp19-CDC5 complex     CC77DRAFT_671236 Ubiquitin system [BR:aalt04121]  Ubiquitin ligases (E3)   U-box type E3    CC77DRAFT_671236 DNA repair and recombination proteins [BR:aalt03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     CC77DRAFT_671236 SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_THOC3 Prp19 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_1st ANAPC4_WD40 WD40_WDHD1_1st WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st WDR55 Beta-prop_NOL10_N Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_EML Beta-prop_VPS8 B-prop_COPA_B_2nd Beta-prop_NUP159_NUP214 eIF2A Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_2nd WD40_Gbeta WD40_MABP1-WDR62_1st WD40_like Beta-prop_ACSF4 Beta-prop_CAF1B_HIR1 Beta-prop_Aladin PEP5_VPS11_N DSE1_N KNTC1_N Beta-prop_WDR19_2nd U-box Beta-prop_WDR35_TULP_N Beta-prop_At4g14310 DUF3450 Cytochrom_D1 TP_0598_N zf-Nse V_ATPase_I_N Beta-prop_IFT80_2nd DUF5711 At3g49055 Motif Other DBs NCBI-GeneID:  29118293 NCBI-ProteinID:  XP_018378804 JGI:  671236 UniProt:  A0A177D139 LinkDB All DBs Position Unknown AA seq 471 aa AA seqDB search MLCAISGEAPREPVASRKSGNVFEKRLIEAHISEHHTDPVTGEDLATEDLIELKSPNVVT PRAPNFTSIPAMLSAFQNEWDALVLETHTLKQHLAQTRQELSTALYQNDAATRVIARISK ERDEAREALSNVTISGGGQGDAMQVDGQGLPQQLVALVEETQQELFGTRRKRPAPADWTS GDAISNYDVAKTTESLYPGSTKIAVNEAQNVLFGGADGTTGVYSLTQGKVLETFNAGSAV TSVAWWGERALVGTSAGTVKVFSNGDDVAQIASHAGAVTSMSVHPSGKMLATAGADKRYA IHELTTFKTVSQVYVEAEITCVSFHVDGMLFFIGSSDGNIRIYDIKTGTQMAELATSAPV VDLKFSENGTWFAVVQENSSSVAIWDIRKQAAIHTLESGSPVNSVSWDYTGQFLAIGGTG SVSVQQYTKATKSWAELVRKAAPAKDVAWGGRAENVVALTTEGGLAVLTAP NT seq 1416 nt NT seq  +upstreamnt  +downstreamnt atgctctgcgcaatctctggcgaagctccccgcgaacccgttgcctcgcgcaaatcgggc aacgtcttcgaaaagcgcctcatcgaagcccacatctcagaacaccacaccgaccccgtt actggcgaggatctcgcgacggaggacctcatcgagctcaagtcgcccaatgtcgtcact ccgcgcgcgcccaacttcacctcgataccggccatgctcagcgccttccagaacgagtgg gatgcgctggttctggagacgcatacgctcaagcagcacttggcgcaaacgaggcaggag ctgagtactgcgctgtaccagaacgatgcggcgacgagggtcatcgcgcggatatccaag gagagagacgaggcgcgcgaggcattgtccaacgtcaccatcagtggaggcggccagggc gatgccatgcaggtggacggccagggcctgcctcagcagcttgtagctcttgtggaagag acacagcaagaactcttcggcacccgacgaaagcgacctgcgccggcagactggacctct ggggacgccatttccaactacgacgttgccaagacgaccgaatctctatacccaggcagc accaagattgcggtcaacgaggcacagaatgtgctgttcggtggagcggatggcaccacg ggcgtctactcactgacccagggcaaggtcctggagacattcaatgcaggcagcgcagtc acatcggtggcatggtggggagagcgcgcgcttgttggaacatcggcaggcacagtcaag gtgttctccaacggggatgacgttgcgcaaatagcttctcacgccggagctgtcacgtcc atgtccgtacatcccagcggcaagatgctcgcaaccgccggcgccgacaagcgatacgcc atccacgaacttacaaccttcaagacggtctcgcaagtctacgtcgaagccgagatcaca tgcgtctcgttccacgtagacggcatgcttttcttcatcggaagctccgacggcaacatc cgcatctacgacatcaagactggcacacaaatggccgaactcgcaacttcggctcccgtc gtcgatctcaagttttctgaaaacggaacttggttcgccgtcgtacaggaaaactcgtcc agtgtcgcgatttgggacatcaggaagcaggctgccatccacacgcttgaatctggcagc ccggttaatagcgttagctgggattacaccggccagttcttggcaattggtggaactggc agtgtttcggtgcagcagtacaccaaggcgacgaagagctgggctgagctcgtcaggaag gcggcgccggcaaaggatgtcgcttggggtggcagggccgagaatgttgtggcgctgact accgagggtggtttggcagtgctgacagcgccttag

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