Alternaria alternata: CC77DRAFT_768790
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Entry
CC77DRAFT_768790 CDS
T05291
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
aalt
Alternaria alternata
Pathway
aalt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC77DRAFT_768790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_768790
Spliceosome [BR:
aalt03041
]
Complex B
Other components
Prp19-related factors
CC77DRAFT_768790
Complex C
CC77DRAFT_768790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
29118719
NCBI-ProteinID:
XP_018387420
JGI:
768790
UniProt:
A0A177DT99
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MANPVKIDEAAHASEAPSKTDDEIITVSAPLKIDEAEASTTMSATETPTPDATSNQEVTA
PEDNSLATTTNPDPKVALAARMARFKALQAAKVNGRKATEREVRDAEDRSSRLAQISKLG
ALNEKASYKLLKSEDPDFERKRNWDYTVEESESWDKRLKKKAKNRDGVAFADYRNEANKV
YKRQIGQMSKVDMEAYAEEKAKKLQSQVSSGLLQLVETDAGEIYTVDNQGRINTPVDEAY
SHDHKPSKEAVDRLVEDLEKGERARLKARAARGIRDEQDVGDVTYINQKNKQFNDKLSRF
YNKYTSEIRDSFERGTAI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggccaacccagtaaaaatagacgaagcggcgcatgcgtctgaagccccttcaaagacc
gacgacgagatcatcaccgtgtctgcaccactgaaaatcgacgaagcggaagcctcaacc
accatgagcgcgaccgaaacacctacaccggatgcgacttccaaccaggaagtcactgcg
ccagaagataactccttagccacaacgacaaaccccgacccgaaggtcgcccttgccgca
cgaatggcccgcttcaaagcgctccaagccgccaaagtaaacggccgtaaagcgacagag
cgcgaggtccgcgatgctgaagatcgtagctctcgccttgcgcaaatttccaaactcggc
gcactcaacgagaaagcctcctacaaactcttgaaatccgaagaccctgatttcgagcgt
aaaaggaattgggactacacggttgaagagagcgaaagttgggacaagagacttaagaag
aaagcgaagaacagggatggtgtcgcatttgcagactacaggaacgaggcgaacaaggtg
tacaaaaggcagattggtcagatgagcaaagtagatatggaagcgtacgcagaggagaaa
gcaaagaaactgcaatcgcaagtatcttccggccttctccaactcgttgagacggacgca
ggcgagatttacacagtcgataaccaagggcgcatcaacacaccagtcgacgaagcgtat
agccacgatcacaagccatccaaagaagctgtcgataggctagtagaagacctggagaag
ggcgagcgtgcaaggttgaaggccagggccgcaaggggtatacgcgacgaacaggatgtc
ggcgatgtcacgtacatcaaccagaagaacaagcagttcaacgacaagctctcgcgcttc
tacaacaaatacacaagcgagatacgggacagcttcgagcgaggaacagcgatttaa
DBGET
integrated database retrieval system