Alternaria alternata: CC77DRAFT_92249
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Entry
CC77DRAFT_92249 CDS
T05291
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
aalt
Alternaria alternata
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_92249
Enzymes [BR:
aalt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CC77DRAFT_92249
Spliceosome [BR:
aalt03041
]
Complex C
Other components
Complex C specific factors
CC77DRAFT_92249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
NACHT
AAA_23
AAA_30
Cas3-like_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
29119331
NCBI-ProteinID:
XP_018385449
JGI:
92249
UniProt:
A0A177DL39
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MAEDGDTESALIPSLYKPSALLPIAQLKDQLLYTIETYPVTIVVGETGSGKTTQIPKFLL
EAGWCNGGQQIAITQPRRIACTSVAARVAEELATPLGQKVGYSIRFEDVTSAATNVKFVT
DGLLLREMLVDPLLSRYSVIMVDEAHERSLSSDILLSLLKKVLVKREDLRVVVSSATLEA
ERFLDFFSPDQGEKVHGMNKEEFGCIVGIEGRTYPVEIQYLQEPTNNYVEASIDTVIKIH
EHESEGDILVFLTGREEIDDAIDKLGDRIADMSSSQQRLMPLPLYAGLPTEDQNLIFTKP
TQNTRRVIFSTNISEASVTIDGIVFVIDSGYVKLRAYNANIGIENLAVVPVSKASATQRA
GRAGRTRPGKCFRLYPESVYEGLEEATFPELARSNLAPVILQLLNLGITNVVRFDYLSPP
PSALVTRALDMLYSLGALDAHARLTKPFGMRLAELPLEPMLGRAVLKAAEPEFGCLSEML
TIAAMMTLQGNAFVSHDGGKKQLDAARRKFAVAEGDHLTLYNVYEAFVKAGMGNTAWCHS
NSLNHKSLVKAVSVRKQLAAYLDRFGVKENVLASSGVLRVGGTPLAERVRRCLTTGFFAH
AARMKADGTFTTVDGKTTLWAHPSSVFFTRKADWVIYTEIQSTKDKIYIRDLSTVDIDWL
TQYAPEYYKIKNGGR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatggggatactgagtctgctttgattccaagtctgtataagccatccgct
ttactaccaatcgcacaactcaaagatcaactgctctacacgatagagacgtaccctgtg
actattgttgtcggcgaaacaggcagtggtaaaacaacgcagataccaaaatttctgctt
gaggcgggctggtgcaatggcggccagcagatagccatcactcaaccccggcggatagca
tgtaccagtgtagctgcaagagtggcagaggaactagcgacaccgctcggtcagaaggtc
ggatacagcattcggttcgaagatgttacgtccgcagccacaaatgtaaagttcgtcaca
gatgggttgttactacgcgagatgcttgtcgatccgctactctcccgctactctgtcatc
atggttgacgaagcacatgagcgcagcttgtcctccgatatactgctgagtctgttgaag
aaagtgctggtgaaaagagaagacttgcgcgtcgttgtgagcagcgctacactcgaagcc
gaacgctttcttgacttcttcagtcccgatcaaggcgagaaggttcatggcatgaacaaa
gaagaattcggatgcattgttggtatcgaaggacgcacatatccagttgagattcaatac
ttacaggaaccaacaaacaactacgtcgaagcatcaatcgacacagtcatcaagatccac
gagcatgagagcgaaggtgacattctcgtctttctgacagggcgcgaggaaatagatgac
gcgattgataaactgggcgaccgtattgccgatatgtcttcgtctcagcaaagactcatg
cctttacctctctatgccggcctgcccacagaagaccagaatctcatcttcacaaagcca
acgcaaaatacgcgacgcgtcatcttcagcaccaacatttccgaggcgtctgtgaccatt
gatggcatcgtcttcgtgatagactcaggatacgtcaagctccgcgcctacaacgccaat
atcggcatcgaaaatctcgctgttgtcccggtatcgaaagccagtgccacacaaagagca
ggtcgcgcaggtcgaacgagaccgggcaaatgctttagactgtacccagagagcgtgtat
gaaggcctggaagaagccacgttcccagagctcgcccgctcaaacctcgcccctgtaatt
ctgcagcttcttaacttgggaatcacaaacgtagtgcgattcgactacctctccccaccg
ccatcagcactcgtgacacgcgctctagatatgctgtactctctgggggccttggacgct
cacgctcggcttacaaagccctttggtatgcgcctggcagagcttcctctcgaaccaatg
cttgggcgcgctgtgttgaaagcggctgagccagagtttggttgcttgagcgagatgctc
acgatagccgctatgatgacgctccaaggcaacgcctttgtatcccatgatgggggaaag
aaacagctcgatgcagcgaggcggaaatttgccgtagcagagggtgatcatcttacacta
tacaacgtgtacgaagcctttgtgaaagctggtatgggtaacacggcatggtgccactcg
aacagtcttaatcacaagtccctcgtcaaggcagtcagtgtccggaaacaattggctgcc
tatctggaccgttttggcgtcaaggaaaatgttctcgcatcatcgggtgtactgagagtt
ggtggtaccccacttgcggagcgtgtccgccgctgtttgactaccgggttcttcgcgcat
gctgcgaggatgaaggcagatgggactttcaccaccgtggacgggaagacgacactatgg
gctcatccaagttctgtgttcttcacgaggaaggctgattgggttatatacacggagatc
cagtctacaaaagacaaaatctacatcagggatttgagtacagtggatatcgactggctg
acacagtatgcgccagagtactacaagatcaagaatggcggtcgatga
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