Alternaria alternata: CC77DRAFT_925062
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Entry
CC77DRAFT_925062 CDS
T05291
Name
(RefSeq) syntaxin-5
KO
K08490
syntaxin 5
Organism
aalt
Alternaria alternata
Pathway
aalt04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
CC77DRAFT_925062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aalt04131
]
CC77DRAFT_925062
Membrane trafficking [BR:
aalt04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
CC77DRAFT_925062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Surfac_D-trimer
DUF16
Syntaxin-18_N
REST_helical
Sec10_N
DUF1664
Motif
Other DBs
NCBI-GeneID:
29119433
NCBI-ProteinID:
XP_018391358
JGI:
925062
UniProt:
A0A177E1W4
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MAVSIQDRTDEFRSILAQAQRRQAQSKTGAQRQSLLTQQEKAQANANPRRQRSEFARNAA
DVARGVASTMQKLERLSQLAKRKTLFDDRPVEFDELTFVIKQDMTALSGQVQALQQMNSK
QHPKSKPGVDQEGEHNSNVVGLLKDKLQNVGMNFKDVLEVRTKNMQASRSRTEQFLSTAA
QQSHSSLEPGRTDSPLYQTPQRGRSPGGFGRNTSAVQQDLLSLEPSGSSALTRGGPQSDA
QMLLMEEAQPQNAYIQERGRAIESIESTIQELGGIFSQLAQMVSEQGEQIQRIDANTEDV
VDNVEGAQRELMKYWSRVQGNRWLVAKMFGVLMIFFLLWVLISG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggccgtatcgatacaagaccgcaccgacgagttccgctctattcttgcgcaggctcag
cgacggcaggcacaatccaagacgggcgcgcaacggcagtcgctcctcacacagcaagag
aaggcacaggcaaatgccaacccacggcgtcaacgctccgagtttgcgcgcaatgccgca
gacgttgcccgaggtgtcgcaagcaccatgcagaagctcgagcgcctctcacagctggcc
aagcgcaagacgctttttgacgatcggcccgtcgagtttgacgagctcacttttgtcatc
aagcaagatatgaccgccctgtcaggccaggtgcaggctctccaacagatgaactccaag
caacaccccaagtcgaaacctggtgtggatcaagagggagagcacaacagcaatgtcgtg
ggactgctaaaagacaaactacaaaacgtgggaatgaacttcaaggatgtcctcgaagtg
cggacaaagaacatgcaggcatcgcggtcgcgcaccgaacaatttctgtcaacagctgcc
cagcaatcccacagcagcctcgagccaggcaggaccgattccccgttataccaaacaccc
cagcgaggccgctctcctggaggttttggccgcaatactagcgcagtgcagcaagaccta
ctctcgctcgagccttccggttcgtcggctctgacgcgaggcggtccccaatcggatgca
cagatgctgctgatggaagaagctcagccccagaacgcatacattcaagagagaggacgg
gcaatcgagtcgatagagtctaccattcaagagctaggaggcatcttcagtcagctcgcc
cagatggtatctgaacaaggagagcagatccagcgtatcgacgccaacactgaggacgtt
gtagacaatgtcgagggtgcccaacgcgaattgatgaagtactggagccgtgtgcagggt
aacaggtggcttgttgcaaagatgttcggtgtgctaatgattttctttttactctgggta
ctcatttccggatag
DBGET
integrated database retrieval system
