KEGG   Alternaria alternata: CC77DRAFT_926183
Entry
CC77DRAFT_926183  CDS       T05291                                 
Name
(RefSeq) exoribonuclease family protein
  KO
K12586  exosome complex component RRP43
Organism
aalt  Alternaria alternata
Pathway
aalt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CC77DRAFT_926183
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aalt03019]
    CC77DRAFT_926183
Messenger RNA biogenesis [BR:aalt03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CC77DRAFT_926183
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 29119497
NCBI-ProteinID: XP_018390877
JGI: 926183
UniProt: A0A177E148
LinkDB
Position
Unknown
AA seq 344 aa
MATTTQSSPALTFPRPIFAAVSPHPFLQAHLSAEKKKPIRANGRTANEFRTPGINTGSLT
HCNGSAVVRLGNTSVVCGVRAEILKEEDIPGTYKYPGQNADDEDDGDDEEVEELRLLVPN
VELSTGSTPSHIPGNAPSTYAQTLITRIRSLLNSTHLLRASDLRILYKPSTNPEDPDTEA
ETQLKGYWVLYLDVFFISIDGNAFDAAWISILAALRDTLLPHAYYDEEYEGILCSDEPNE
AHQLQLRGLPIPSTFAVFEGRREEEDEAVDFVLSDPDAFEEGVCRETVSVMVDCAGGNKG
TKDLVIRRVEKSGGGVVGRETMGALVKRSIDRWGVVESVLSGKA
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggccaccacaacccaatcctccccagcgctcacattccctcgcccaatcttcgccgct
gtctccccgcacccgtttctccaagcgcatctctccgctgagaagaagaagccaattcgc
gccaacggccgcaccgcaaacgaatttcgcacaccaggtatcaacaccgggagtttaact
cactgcaacggcagtgcggtcgtgcgactcggaaacacaagtgtggtgtgcggagtgcgc
gcggagatcttgaaagaagaggacataccaggtacctacaagtacccaggtcagaatgca
gacgacgaagacgacggggatgatgaggaagtggaagagctgaggctcttggtcccaaac
gtggaactatctacaggaagcacgccctctcacatccccggcaatgcaccgtccacatat
gcgcaaacacttataacccgcatacgctctctcctcaactcaacacaccttcttcgcgcc
tcagacctccgcatactatataagccatcaacaaatcccgaagatccagacacggaggcc
gagacacaactgaaaggctactgggtcctctacctcgatgtcttcttcatcagcattgat
ggcaacgcattcgatgctgcgtggatatctatacttgccgcactccgcgatacacttctt
ccacacgcttactacgacgaagagtacgagggaatactatgctcggacgaaccaaatgag
gcgcatcagcttcagctacgtggtctaccaatacccagcacattcgcagtgttcgaaggc
aggagagaagaggaagacgaagcagtagactttgtactcagtgatccggatgcgtttgag
gagggcgtatgcagagaaacggtcagtgtgatggtggattgcgctggcggaaacaagggt
acaaaagacttggtcatcaggcgagtggagaagagcggtgggggtgttgtggggagagag
acaatgggagctctggtcaagagaagcatcgatcgatggggtgttgtcgaaagtgtgttg
agtgggaaagcttga

DBGET integrated database retrieval system