Alternaria alternata: CC77DRAFT_927254
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Entry
CC77DRAFT_927254 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
aalt
Alternaria alternata
Pathway
aalt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC77DRAFT_927254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_927254
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CC77DRAFT_927254
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CC77DRAFT_927254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
GDH_HM1
Motif
Other DBs
NCBI-GeneID:
29119577
NCBI-ProteinID:
XP_018390049
JGI:
927254
UniProt:
A0A177DYR3
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MFQTQQNPGRGAPLGANRLQNGKMGGASQWGFGAPMGAPGLPNTQTRTNGGAMSSFAQAM
GGSQPHTPLNLEEFPSLSGAPQAQQNTTAQQMWANPTIRAAQQNQQNTIGRPQGQGQQQG
QGQAAQAANQQQQNQGQDDSSQSQFSGAGDDYRFGGQGGVGQLGGVQPQTSNVEEFPPLG
GAGGDIPQDRRAGLIQNAAAFGANGNNAFPGLGQTRNGLSSPTDSQQDRSINPTVGGRAL
SGTASRTPFENMRTSNQADGNQRIGQSGNMFSLGPQMGMRGGADLAPGGQRPQQNQFDQT
FGAEVLGSPNAQNMLHKKLSDMTDSERYGLPGLLAMIPMESPDYSSLAMGQDLTVLGLDL
SRPDNSPLHPTFGSPFVESNVKPVIPPDFTLPAAYTVTNVPPLHSKMASFSAETLLAIFY
QFPRDILQEIAAQELYNRDWRWHMKLQQWMMKDPDLAAPMRLSPKEEHGWYLFFDVKNWR
RERKEFDLNYDHLDQRHGSPAMAGQM
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaacgcagcagaacccgggccgcggtgccccattaggtgcgaataggttgcag
aatggcaagatgggtggcgcatctcaatggggattcggagcccccatgggcgcgccaggc
ttgccaaacacgcaaacacgaacaaacggcggagctatgtcaagctttgcgcaagcaatg
ggcggctcacagcctcatacgccgttgaatcttgaggagttcccttcgctatcgggcgca
ccgcaagcgcaacagaacacgaccgcgcaacagatgtgggcgaaccctacgatacgagcg
gcgcaacaaaaccagcagaacacgatcggacgtccacagggccaaggacaacagcaaggg
caaggtcaagctgcacaagctgcaaaccaacaacagcagaaccagggacaggatgattca
tcccaaagtcagttttctggtgctggcgatgactatcgatttggaggacaagggggtgta
ggacaactggggggtgtccaaccgcagacgagcaacgtggaggaatttccaccgttgggt
ggcgctggcggagatattccacaagaccgaagagctggcctgatacagaatgctgcggct
tttggagccaacggaaacaacgccttccctggccttggacagacacggaatggcctttcg
agccccacagatagccagcaagaccggagcatcaaccccactgtaggtggcagggcgcta
tctggcacagcatcacggacgccctttgagaacatgcggacaagcaaccaagcagatggg
aatcaacggataggacagtcagggaacatgttttctttaggtcctcagatgggtatgcga
ggcggtgcagatcttgcccccggaggacagcgaccacagcaaaaccagttcgatcaaacg
tttggagcagaggttctcggctcccccaacgctcaaaatatgctacacaagaagttgtcg
gacatgacagactcagaacgatacggactgcctggattgttggcgatgatacctatggaa
agccctgactactcttcgctggctatgggtcaagacctgacagtcctgggcctggacctg
agtcgaccagacaactcaccattacatcccacttttggttcaccgttcgtggagtccaac
gtcaagccagtgataccaccagatttcactctacccgcagcatacactgttacgaacgtt
ccgccgctacattcgaaaatggccagcttctctgcggagacactgctagccatcttctat
cagttcccgcgagacatcctgcaagaaattgctgcacaagaactgtacaaccgtgactgg
cggtggcatatgaagctccagcagtggatgatgaaggacccagatctggcggcgcccatg
agactgtcaccaaaagaagagcatggctggtacctattcttcgatgtcaagaactggagg
agagaaaggaaagagtttgacctcaactacgatcaccttgatcagcgtcatggtagccct
gccatggcgggacaaatgtag
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