KEGG   Alternaria alternata: CC77DRAFT_929981
Entry
CC77DRAFT_929981  CDS       T05291                                 
Name
(RefSeq) Sm-like ribonucleo protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
aalt  Alternaria alternata
Pathway
aalt03040  Spliceosome
aalt04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC77DRAFT_929981
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    CC77DRAFT_929981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aalt03019]
    CC77DRAFT_929981
   03041 Spliceosome [BR:aalt03041]
    CC77DRAFT_929981
   03032 DNA replication proteins [BR:aalt03032]
    CC77DRAFT_929981
Messenger RNA biogenesis [BR:aalt03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     CC77DRAFT_929981
Spliceosome [BR:aalt03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CC77DRAFT_929981
  U2 snRNP components
    CC77DRAFT_929981
 Complex B
  U1 snRNP components
    CC77DRAFT_929981
  U4/U6.U5 tri-snRNP components
    CC77DRAFT_929981
 Complex C
  U2 snRNP components
    CC77DRAFT_929981
DNA replication proteins [BR:aalt03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CC77DRAFT_929981
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 29119732
NCBI-ProteinID: XP_018388685
JGI: 929981
UniProt: A0A177DU53
LinkDB
Position
Unknown
AA seq 80 aa
QGHIVTLEITSGEVYRGKLIEAEDNMNVQLKDITVTARDGRVSHLEQVYIRGSHVRYFIV
PDMLRYDVLYPSNKKGANRI
NT seq 243 nt   +upstreamnt  +downstreamnt
cagggtcacattgtcacgcttgagatcacatcgggtgaagtctaccgtggcaagctaatc
gaagccgaggacaacatgaacgtacagctgaaggacatcactgtcaccgctcgcgacggt
cgcgtctcacatctcgaacaagtgtacatcaggggaagccacgtgcggtacttcattgtt
cccgacatgttgaggtatgatgtgttatacccgtcgaacaagaaaggcgctaacagaata
tag

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