Alternaria alternata: CC77DRAFT_934586
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Entry
CC77DRAFT_934586 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K08736
DNA mismatch repair protein MSH3
Organism
aalt
Alternaria alternata
Pathway
aalt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CC77DRAFT_934586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalt03400
]
CC77DRAFT_934586
DNA repair and recombination proteins [BR:
aalt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CC77DRAFT_934586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
DUF4911
Motif
Other DBs
NCBI-GeneID:
29119986
NCBI-ProteinID:
XP_018386718
JGI:
934586
UniProt:
A0A177DPC5
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MAPKNSQSSQPKSSQKATQPTISSFFTKKPSQTPESAPKPAPKAPAPPPITDPNQDDDNG
DDEDGLPVSQTIPVRKRAIDEDNVQETRRSSPSKRVRFDKGDSPRQASAPKPQKITDRTS
KFLFSSSPPARDESRQDDEEEAALSQRQKERLHDKFVKKLGRPDSFAELRRRNKIISDDS
PNANGEEGDGDEDEEDEPAQKPTKGKKGAVTKKASKLTPMEIQYLDIKRKHLDTIIVMEV
GYKYKFFGEDARTASKALGIVCIPGKFRYDEHPSEAHLDRFASASFPTHRLQVHVKRLVQ
ANHKVGVVRQLETAALKAAGTNRNAPFVRKLTNLYTKGTYVDDVEGLEAPTEGSGASVQS
TGYLLCITESNAKGWGTDEKVHVGLVAVQPATGDIIYDDFEDSFMRSEIETRLLHIAPAE
FLVVGDLSKATEKLIQHLSASKTNVFGDRSRVERVEKPKTMAAQAYSHISNFYAGKMKSS
QEADSDKQGAILDKVHQLSEHVTICLSSMITYLSEYGLEHVFDLTKYFQPFSARSYMLLN
GNTLSSLEIYQNQTDYTSKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKERLEERIAAVE
ELKEGDNTIPVDKLKFVLGKIRTDLEKVLIRIYYKKCTRPELLAALQSLQEISSQYLSAK
TPEQSGFSSSLLSEAVSNVPKIYDDLNSFLEKINAQAAKDDDKYSFFREEHEAEDINDLK
LSIASVEDDLNTHRKDAAAKLGKSQVVYVTVAGIEYLIEVKRKAPEEKKVPASWQQISAT
KTTLRFHTPEVKRMLQERDQYKESLAAACEKAYIGLLEDISSKYQQLRDCVASLATLDAL
LSLATLANQPGYVKPTFTDDIELNITGGRHPMVEQLLLENYVPNDLSLSHNSTRALLITG
PNMGGKSSYVRSAALIAIMGQIGSYIPATEARLGMLDAVFTRMGAFDNMLKGESTFMVEL
NETSDILKSATPRSLIILDELGRGTSTFDGVAIAEAVLDYVIRDLQSLTLFITHYQHLAK
LSGRFSNGELKNVHMRFEEQNGGKEVVFLYEATEGISHRSYGLNVARLARVPEKVIDVAE
VKSTELEESMGACKLGNLSRMMKGLLTDESEASLDRLVEGIEQL
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaaaacagtcaatcgtcgcagccaaagtcgtcgcagaaagccacgcaaccg
accatctcgagcttcttcacaaagaaaccgtcgcaaacgcccgagtcggcacccaagcct
gctccaaaggcgcctgctccaccccccattaccgacccaaaccaagacgacgacaacggt
gacgacgaggatggtttacccgtctcacagaccatccccgtccgcaagcgcgcgatagac
gaggacaatgttcaggaaacccgacgctcttccccctccaagcgcgttagattcgacaag
ggcgattcgccgcgacaggcgtctgcacctaaaccccaaaaaatcactgatcgaacttcc
aagtttctcttctcctcgtcacctcccgcacgggacgagagccgtcaagatgacgaagag
gaagccgcgctctcgcagaggcagaaggagaggctacacgacaagttcgtcaagaagctg
ggtcgaccagatagctttgccgaactcaggaggcgcaacaagattatatccgacgacagt
cccaatgccaatggcgaggaaggcgatggagacgaggatgaagaggatgagcctgcccag
aagcccaccaagggaaagaagggcgctgtgaccaagaaggcgagcaagctgacacccatg
gaaatacaatatttggacatcaagcgcaagcatcttgacacaatcatcgtcatggaggtt
ggctacaagtacaagttctttggcgaggacgcaagaaccgcgtccaaagcgctgggcatc
gtctgtataccaggaaaattcagatacgacgagcacccttccgaagcacacctcgatcga
ttcgcatctgccagttttcctacacatcgtctacaggtccatgttaaacgtctcgtacag
gcgaatcacaaggttggtgtagtacgacagctagagacggccgcgcttaaagcggcaggt
accaacagaaatgccccctttgtacggaaactcacaaatctttataccaagggtacgtat
gtggacgacgttgagggcctggaagcccccaccgaaggctctggcgctagcgtacagtcg
actggatatctcctttgcatcaccgagagcaatgcgaaaggatggggtacggacgagaaa
gttcatgtcggcttagtggctgttcagccggcgaccggcgacataatctacgatgatttc
gaagatagttttatgcgcagcgagattgagacacggttactccacattgcgccagccgag
ttcttggtcgtaggcgacctgtctaaagccacagaaaagcttatacaacacctgtcagct
agcaagaccaacgtcttcggagacagatcgcgggtcgagagggtagaaaagccaaagacc
atggctgcgcaagcctacagtcacatctcaaacttctatgcaggtaaaatgaagtccagc
caggaagccgactccgacaagcaaggcgcaatcctcgacaaagtacatcagctatcagag
catgtgactatatgtctctcatcaatgatcacatatcttagcgagtatgggctagaacat
gttttcgatctcacaaagtacttccaacccttcagcgccaggtcgtacatgttgctgaac
ggcaacactctatccagtctggagatctaccagaatcaaacagactacacttcgaaaggc
agcttgttctggaccatgaatcggacgaagactcgctttggacagcggttgctgagaaag
tgggtcggccggccactgatagacaaagagagattagaagagcgcatagcggcggtggag
gaactcaaggaaggcgataacaccatacctgtggataaactgaaattcgtgctcggaaaa
atcagaaccgatctggaaaaggtactcattcgcatatactacaagaagtgtacaaggccg
gagctattggcagctttgcagagtctgcaggagatatcgagccagtacctgtcggcgaag
acacccgaacagagtggcttctcctcctcactcctgagcgaagcagtttcgaatgttcca
aagatatacgatgacttgaacagctttttggagaagatcaacgctcaagctgcaaaagac
gatgacaaatattcgttcttccgtgaagagcatgaggcagaagatatcaacgacctgaag
ctgagcatcgcctctgtggaagacgacctcaatacgcatcgaaaggatgcggctgcgaag
ctggggaaaagccaagtagtctacgtcacagttgctggaatcgagtacttgatcgaggtc
aagaggaaggcacccgaagagaagaaagtacctgcttcatggcaacagatctcagccaca
aagacgaccctgcgtttccacactccagaagtcaaacgtatgctccaagaacgagaccag
tacaaagagtcgctcgctgcagcatgcgaaaaagcctacataggcttgttagaagacatt
tcatccaagtatcaacagctccgagactgtgtagcctctttggcaacactcgacgccctc
ctttccttggccacgttggcgaatcagccgggctatgtgaagcctactttcacagacgat
atcgagctcaacatcaccggtggtcggcaccccatggtcgagcaactactcctcgaaaac
tacgttcccaatgacctttccctctcccacaactccacgcgagctctcctcattactggc
cccaatatgggcggcaaatcctcgtacgtacgatctgcagctttgatcgcaatcatgggt
caaatcggttcctacatcccggctaccgaagcgcgactaggtatgctagacgcggttttc
acccgtatgggcgcctttgacaacatgctcaaaggcgaatcaactttcatggtcgagctc
aacgaaacctcggatatcctcaaatccgcgacaccgcgttccctcattatcctggatgag
ctgggtcgtggcacatcaacctttgacggtgtcgccattgcggaagcagtgcttgattac
gttatccgggacctgcagtcgctcacgctgttcatcacgcattaccagcatctggccaaa
ctctcaggtcgcttctccaatggtgagctgaagaacgtccatatgcgctttgaagagcag
aatggtggaaaggaggtcgtgtttctatatgaagccacagagggtataagtcatcgatct
tacggcttgaacgtagcgcgattggcaagggtacctgagaaggtcatcgatgtggcggaa
gtaaagagtacggagctagaagaaagcatgggggcttgtaagctggggaacctgtcgcgc
atgatgaagggtttgttgactgacgaatcagaagcaagtcttgataggcttgtcgaaggc
attgagcagctgtaa
DBGET
integrated database retrieval system
