KEGG   Alternaria alternata: CC77DRAFT_935936
Entry
CC77DRAFT_935936  CDS       T05291                                 
Name
(RefSeq) RNA-binding domain-containing protein
  KO
K12876  RNA-binding protein 8A
Organism
aalt  Alternaria alternata
Pathway
aalt03013  Nucleocytoplasmic transport
aalt03015  mRNA surveillance pathway
aalt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aalt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC77DRAFT_935936
  09122 Translation
   03013 Nucleocytoplasmic transport
    CC77DRAFT_935936
   03015 mRNA surveillance pathway
    CC77DRAFT_935936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aalt03019]
    CC77DRAFT_935936
   03041 Spliceosome [BR:aalt03041]
    CC77DRAFT_935936
Messenger RNA biogenesis [BR:aalt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CC77DRAFT_935936
Spliceosome [BR:aalt03041]
 Complex C
  Other components
   EJC/TREX
    CC77DRAFT_935936
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_ACIN1 RRM_5
Other DBs
NCBI-GeneID: 29120063
NCBI-ProteinID: XP_018385865
JGI: 935936
UniProt: A0A177DKG7
LinkDB
Position
Unknown
AA seq 160 aa
MADAETMDIDQPEQPEVSSADPNASDARTDAGATAVRSIEGWIIIVTNVHEECTEEDLQD
MFGEFGTIKNLHMNLDRRTGYVKGYVLIEYATLEEAKAAIKGANGEELLEQKVTVDFAFV
RPPPASKGRPRDYDKRQSGRGAGRARSKSPGRDGDDMDDE
NT seq 483 nt   +upstreamnt  +downstreamnt
atggccgacgcagaaaccatggacattgaccagcccgagcagcccgaagtctcgtcggct
gaccccaacgccagcgacgcgcgcaccgacgcaggcgcaacagctgtgcgctccatcgaa
ggctggatcatcattgtcaccaacgtgcacgaggagtgcaccgaggaggatcttcaggac
atgtttggcgagtttggaacgattaagaatctgcacatgaacctggacaggaggacgggt
tatgtcaagggctacgtcctcatcgagtacgctaccttggaagaagcaaaggccgctatc
aagggcgccaacggcgaggagctccttgagcagaaggtcaccgtcgactttgcctttgtg
cgccctccgccagccagcaagggccgccctcgcgactatgacaagcgccagagcggacgc
ggtgctggaagagccaggagcaagagtcctggacgcgacggtgacgacatggacgatgag
tag

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