Alternaria alternata: CC77DRAFT_936644
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Entry
CC77DRAFT_936644 CDS
T05291
Name
(RefSeq) exoribonuclease family protein
KO
K12587
exosome complex component MTR3
Organism
aalt
Alternaria alternata
Pathway
aalt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC77DRAFT_936644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_936644
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CC77DRAFT_936644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Drf_FH1
Motif
Other DBs
NCBI-GeneID:
29120101
NCBI-ProteinID:
XP_018385436
JGI:
936644
UniProt:
A0A177DJX2
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MNADRRRNNAPSGGTSAPVFARTIREPQYLEKLRPTRSRGANELRRIFLQTSIIPSASGS
AYLEIPSSSPTTKSTLIPPTSSLKITASIQGPKPLPRSAPFSPSLLLTTTVKFAPFATRQ
RRGYIRDSAERDLGVHLETALRGVIIGERWPKSGVEVVVTILEGDEDGWWGDSASEGNAT
GSGWGLLNVLAGCITVASAAITDAGIDCVDVVCGGVAAITRNPSSTQQQELARILDPCPA
EHREVVAACVVGYLASRDEITEIWMKGDVGSDPDALIEGATHAAVGSLAVVKEVLLEALQ
TKFQGQIEESESGLKRKTRDVDMTG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgacagaagacgaaacaatgcgcctagtggtggaactagtgcgcctgtgttt
gcgcgaacgattagagaaccgcagtatctggagaagttgagaccgacaaggtcaagaggc
gcgaatgagcttcgcaggatctttctccaaacatccattataccttccgcatcgggctct
gcctaccttgagataccttcgtcctcccctacgaccaaatcgacactcatcccaccgact
tcgtcactcaagatcactgcttctatccaaggcccaaagcctctcccccgcagcgcgcca
ttcagtccatcgctccttctcacgaccacggtcaagttcgccccgttcgcaacacgtcaa
agacgaggctatattcgggattcggcagagcgcgatttgggtgttcacctggagactgca
ctacggggtgtcatcatcggagagagatggcctaagagcggagtcgaagtagtggtcacc
atcctggaaggtgacgaggacggctggtggggtgactccgccagtgaaggaaacgcaact
ggaagcggatggggtctcttgaatgtgttggcagggtgcataacagtcgcgagcgcggcc
ataacagacgccggcatagattgcgtggatgtagtgtgtggaggtgtcgccgcaataaca
cggaaccccagctccacacaacagcaagagctggctaggatactcgacccctgtccagca
gagcacagggaagttgtcgctgcatgtgtagtcggctacctggcttcaagagacgagatc
acagagatatggatgaagggagatgtgggctccgatcctgatgctttgattgagggagcc
actcacgcggctgtgggcagtctcgcggtggtcaaagaggtcttgctagaagcgctccaa
accaaatttcaaggccagatcgaggaaagtgagagcgggctgaagagaaagacacgggat
gtggacatgacaggatga
DBGET
integrated database retrieval system
