Alternaria alternata: CC77DRAFT_939848
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Entry
CC77DRAFT_939848 CDS
T05291
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
aalt
Alternaria alternata
Pathway
aalt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC77DRAFT_939848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aalt03021
]
CC77DRAFT_939848
03041 Spliceosome [BR:
aalt03041
]
CC77DRAFT_939848
03036 Chromosome and associated proteins [BR:
aalt03036
]
CC77DRAFT_939848
Transcription machinery [BR:
aalt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CC77DRAFT_939848
Spliceosome [BR:
aalt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
CC77DRAFT_939848
Complex B
CC77DRAFT_939848
Complex C
U2 SnRNP specific factors
CC77DRAFT_939848
Chromosome and associated proteins [BR:
aalt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
CC77DRAFT_939848
TFTC complex
CC77DRAFT_939848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
29120294
NCBI-ProteinID:
XP_018383956
JGI:
939848
UniProt:
A0A177DFL2
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MSLYALTVKQPTATQDAISGDFLGNGKQQILTASGSRLAILEVSRRQKGFQELYSQDVFG
IIRRIAKFRIAGGTKDHIVITTDSGRLVTYEYMPDEHTFKTVHFETFGKSGIRRVVPGEY
LAADPKGRAIMIASTEKNKLVYILTRSGQTDIAISSPLEAHKPQTLVYCLIGLDVGYDNP
MFATLEVDYSNSETDPTGEAYEEIKKELVYYELDLGLNHIVRKWSEPVDRTANTLFRVPG
GPNAPSGVLCCGEDSITYRRIFNNKSSVHRLAIPRREGATEDPNRKRMIVAGTLYSLKGG
DFFYLLQTEDGDVFKLTVEATSGTVDKIKIKYFDTIPVATSICILRAGFVYAACESGDRI
LYELESLGDETEDPVFESDQFPVDPETSFAPPFFKPRALVNLTAVETMPSLNPIMGMEVA
NPALEDAPQVYTINGAGGRSSFRTTRNALEVLDLIESPLPQNASDVWTTKLTSEDETDTL
IVMCLHSRTLVLKIGDDVEEAANTGFLPDTNTLGVQQFGEDCIIQIHPKGIRHIQGIQFP
NDDASATHASLTDWQPPAHRTIVACATNNRQVAIALSSGQILYFECDADGSLAMAEEEIA
LDSTINCLAMPDVPEGSVRAFFLAVGCSDQTVRIFNLSPDMEGNILRSISVQALTSPPSD
LTINLMTDKSPRGYSQFLHIGLRSGVYIRSVLDEMTGDIGDTRRRFLGPEPIKFAKVTVA
GEPAIIAMTSRPWLGYTHPRTGVLQLTPLNYIPFKSAWNFDGSQFKGIICVSGNELRIFT
FNDLTDNTTYENIPLKYTPRKMVGWHDQGVFYVIESDNNTISADRRQQLIAHAGVKKEDD
GTNGSMEVENANGGATNGTDDSDELPAVDFGYPRAQGSWASCIQVVDPVSEKTVTHTVEL
NGNQSLVSAALVFFESRGEEAFLVVGTAKDLSFTPFKYTSASIQVYKINPTGRELEFFHE
TEVSDPPLALLAFKGKLIAGVGRHLCLYDCGMKSVLRKAQAPNCVPTRITDLKTQGSRLV
VSDQAQSVTYVVHKDQVHPNRLIPFVDDTIARHTSASEMLDYDTTVGGDKFGNIWLVRCP
QKVSESSDESPDGSDLLVDKGYLGGTPNRLDLIAHYFTNDIPVSIQKTVLLSGGERIIFW
AGLQGTLGALIPFNSRRQHKMFQQLELQLRSDDKPLSGRDHLAFRSYFAPVKSVIDGDLI
ERFLVLSRDKRESIAGQMTGAEWTPSMIDEAIWNMRGLYAF
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtacgccttgacggtgaagcagccgacagcgacacaggacgccatttccggc
gactttcttggaaacggcaagcagcagattctcacagcgagcggctcacgactggctatc
ctcgaggtctcgcggcgacagaagggcttccaagagctgtactcgcaggatgtgtttggc
atcattcgtcgtatagccaagttcaggatcgcaggcggcaccaaagaccatattgtcata
accaccgactccggacggttagtcacatatgagtacatgccagatgagcataccttcaag
accgttcacttcgagacgttcggcaagtctggaatacgacgcgtagtgccgggcgagtat
ctagcagccgacccgaaagggcgcgctatcatgatcgcctcgacggagaagaacaagctt
gtctacattcttacccgaagtggccagacggatattgccatctcctcaccgctagaggca
cacaagccacagacgttggtgtactgccttattggacttgatgttggatatgacaatccc
atgttcgctacattggaggtagactactccaactcggagactgaccctactggtgaagcc
tacgaagagatcaagaaggagttggtatactacgagctggaccttggtcttaaccatatc
gtccggaagtggtcggagccagttgatcgtaccgccaataccctcttccgggtacctgga
ggaccaaacgctccgagcggtgttctatgctgtggagaggatagcatcacataccgccgc
atcttcaacaacaagtcaagtgtgcaccgactggccattccacgccgcgaaggagccact
gaagacccaaatcgcaagcgcatgatcgttgctggtactctatactctctcaaaggcggt
gatttcttctacctcctacaaacagaggacggtgatgtcttcaagcttactgtagaagcc
accagcggtaccgtcgacaagatcaagatcaaatactttgataccatccccgtcgcgacg
agcatttgcattctgagggcaggcttcgtgtacgctgcctgcgaatctggagaccgcatc
ttgtatgaactggagtctttgggagacgagacggaagatcctgttttcgagagcgatcaa
ttccctgtcgaccctgagacctctttcgcacctcccttcttcaagcctcgggcgcttgtc
aacctcactgcagttgagacgatgcccagtctcaatccgattatgggcatggaagttgcc
aaccctgcgctggaggacgcgccccaagtttacacgatcaacggtgccggtggccggagt
tcattccgcaccaccaggaacgcgctggaggttctggatcttattgagtcgccgttgccg
cagaacgcttccgacgtctggactacgaagctgaccagcgaagacgaaactgatacactt
attgtcatgtgtcttcacagcagaacgctcgttctcaaaattggcgacgatgtcgaggaa
gctgcgaataccggctttcttccagacaccaacacgcttggtgtacaacagttcggtgaa
gactgtatcatccagatccatcctaagggtattcgtcacatccagggcatccagttccct
aatgacgatgcaagtgcgacgcacgctagtctgactgactggcaacccccagcgcatcgc
actatcgtagcttgtgccacgaacaaccgacaagttgctatagcgctaagttccggccaa
atcctgtactttgaatgcgacgcagatggatcgcttgccatggctgaggaggagattgct
ttagacagcactatcaactgtcttgcaatgcctgatgtacctgagggtagtgtgcgagct
ttcttcttggctgtcgggtgcagcgaccagactgtcaggattttcaacttgagtcctgac
atggaaggaaacatcctgcgaagtatctctgtccaggccctcacctcaccgcctagtgac
ttgaccatcaacctcatgacggacaagtctcctcgtggatacagccagttcttgcacatc
ggtctacgaagtggtgtatacatcagatcggtactagatgagatgactggcgacattggc
gacactcggagacgcttccttgggccagagcctatcaagtttgcgaaggtgactgttgcc
ggcgaacctgctattattgcaatgacctcaaggccatggctaggttacactcatcctcgt
accggagtgttgcagctgacaccgctgaactacattccattcaagtccgcgtggaacttt
gatggttcccaattcaagggaatcatctgcgtcagcggcaacgagctacgaatcttcacc
ttcaatgacctaacggacaatacgacttacgagaacataccactcaagtacaccccaagg
aagatggtcggatggcacgaccagggtgtgttctacgtaatcgagagcgacaacaacact
ataagtgccgacagacgccaacagcttatcgcacacgccggtgtcaagaaggaggatgat
ggcaccaacggctcgatggaagtcgagaacgccaacggtggtgcaacgaatggcaccgac
gatagcgacgagcttccagcagttgactttggttacccaagagctcagggcagctgggct
tcttgtatccaagttgtcgatcctgtgagcgaaaagactgtcacccacaccgtagagctc
aatggcaaccagtcacttgtcagcgccgccttggtgttcttcgagagccgtggtgaggaa
gcattcttggttgttggcactgccaaagacttgagcttcactcctttcaaatacacatct
gcttctatccaggtgtacaagatcaaccccaccggtcgtgagctggagttcttccacgag
actgaggtcagcgacccgcctctagcgctacttgcattcaaaggaaagctcattgctggt
gtcggtcgccatctgtgtctctacgactgcggtatgaagtctgtcctacgcaaggctcag
gcaccgaactgtgtaccaacgcgcatcaccgacctcaagacgcaaggcagccgactggtt
gtttccgatcaggcgcagtcagtaacgtatgtcgtacacaaagatcaggtccaccccaat
cgcctgattcccttcgtcgatgacactattgcccgccacacctccgcatcagagatgctg
gactacgacaccacagttggtggtgacaagttcggcaacatctggcttgtgcgctgccca
cagaaggtctccgagtcttctgacgagtcgcctgatggttccgatctcctagtagataag
ggctacttgggtggtacgccgaaccgcctcgaccttatcgcacactactttacgaacgac
attcccgtctccattcagaagactgtcctactatcaggtggtgaacgcatcatcttctgg
gctggtctccagggtactcttggtgcacttatccccttcaactcccgccgacagcacaag
atgttccaacaactggagctacaacttcggtcagacgacaagccactgtcgggtcgcgat
catctcgccttccgcagctacttcgcgccggtcaagagcgtgatcgatggtgatctcatt
gagcgcttcttggtactgtcgcgcgacaaacgagagagcatcgctggccagatgacaggt
gcagaatggacacccagtatgattgatgaggcgatttggaacatgagaggtctttatgct
ttttag
DBGET
integrated database retrieval system
