Alternaria alternata: CC77DRAFT_953501
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Entry
CC77DRAFT_953501 CDS
T05291
Name
(RefSeq) exoribonuclease
KO
K03678
exosome complex component RRP45
Organism
aalt
Alternaria alternata
Pathway
aalt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC77DRAFT_953501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalt03019
]
CC77DRAFT_953501
Messenger RNA biogenesis [BR:
aalt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CC77DRAFT_953501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
29121027
NCBI-ProteinID:
XP_018391989
JGI:
953501
UniProt:
A0A177E450
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MPREAEISLNEREFIKQALQEQIRIDRRAFDAFRPLELTFGDEYGVADVQLGKTRVIARI
SVDVTTPLPERKFDGIFQIVTEFSPMASPAFEVGRPTDAEVILSRILEKAIRRSNALDTE
SLCIIAGLKCFALRADVHIIDHDGGLIDASCIAVMAALQHFRRPDVQVEGDQATILSVRE
REPIPLSILHQPLCVTFSYFEGEIFLVDANLAEEQVRQGEVIITMNKHGEICQIAKYGGA
TINPLALLNCTNVAMQKVKEMGAFIQKRLEEDAKARDAGGLMAELSAENAR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcccagagaagctgagatatcgctcaatgagcgcgaattcatcaagcaagcgctgcag
gagcagattcgtatcgaccgacgcgcattcgacgccttccgtccgcttgagctcaccttt
ggcgacgagtatggcgtcgcagatgttcaactgggcaagacgagggtcattgcgcgcatt
tcggtagatgtgacgacaccactaccagagcgcaagtttgacggcatcttccaaatagtc
acagagttctctccaatggcttctccagccttcgaagttggccgtcccacagatgctgaa
gtcatcctttcgcgcatacttgaaaaagccatccgtcgctccaacgctctcgacaccgaa
tcgctatgtatcattgctggcttgaagtgcttcgctctccgcgcagatgtacacatcatt
gaccatgatggcggactcatcgatgcatcttgcatagccgtcatggccgcactacaacac
ttccgacgacccgatgtccaggtagaaggcgaccaagctaccatcctcagcgtacgcgaa
cgcgaaccgatacccttgtccatactccatcagccgctctgcgtgaccttctcatacttc
gaaggtgaaatattcctggtagatgcaaacttggccgaagagcaagtcagacagggagag
gtcatcattaccatgaacaaacatggcgagatatgtcagattgcgaagtatggaggagcc
acgatcaacccactggctttgctgaactgcacaaatgttgcaatgcaaaaggtcaaagag
atgggtgcctttattcagaagagattggaagaggatgccaaagcaagggatgccggaggg
ttgatggcagagctcagcgctgaaaatgccaggtga
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