Alternaria alternata: CC77DRAFT_959178
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Entry
CC77DRAFT_959178 CDS
T05291
Name
(RefSeq) DNA mismatch repair protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
aalt
Alternaria alternata
Pathway
aalt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aalt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CC77DRAFT_959178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aalt03400
]
CC77DRAFT_959178
DNA repair and recombination proteins [BR:
aalt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CC77DRAFT_959178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
ANIS5_cation-bd
IFN-gamma
Motif
Other DBs
NCBI-GeneID:
29121159
NCBI-ProteinID:
XP_018388177
JGI:
959178
UniProt:
A0A177DTE2
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MASRPEIKEEDESGFCKFFRNLPDKDDETVRIFDRGDYYSAHGEDAKFIANTVYKTTAVI
RKLGREPGLESVTMTITVFRNFLRDALFRLSKRIEIWQSTGKRMDWKVVKQASPGNLQDL
EDELGGQIENAPIILAVKVSAKASEARNVGVCFADASVRELGVTEFLDNDLYSNFESLLI
QLGVKECLIQVDTSKKDVELGKLRTIADNCGCAVAERSATDFGTKDIEQDLPRLLKDERA
AGSLPLTDLKLAMGSAACLIRYLGVMSDSSNFGQYQLYQHDLSQYMKLDAAALKALNLMP
GPRDGAKNMSLYGLLNHCKTPTGSRLLAQWLKQPLMNVKDIERRQQLVEAFVNDTELRQT
MQEEHLRSIPDLYRLAKKFQRKAANLEDVVRAYQVVIRLPGFLSSLEAVMDEQYKEPLDA
EYTDKLRQYMTAFAGLQDMVETTVDLEALDNHEFIIKPEFDESLKTIRKRLDKLKRDMES
EHMRVGDDLNQDTDKKLFLENHKVNGWCFRLTRNEAGCIRQKKQYQEISTQKNGVYFTTN
TLQEKRREFDQLSENYNRTQSGLVNEVVSVASSYVPVVEKLAAVLAHLDVIVSFAHVSVH
APTSYVRPTMHARGTGNTVLKEARHPCMEQQDDISFITNDVSLVRDSSEFLIITGPNMGG
KSTYIRQIGVIALMAQIGCFVPCSEAELTIFDCILARVGASDSQIKGVSTFMAEMLETAN
ILKSATKESLIIIDELGRGTSTYDGFGLAWAISEYIVKEIGAFALFATHFHELTALVDTY
PQVQNLHVVAHISEGTAPANGDADADVDMDAAAVQKKREVTLLYKVEPGFSDQSFGIHVA
ELVRFPQKVINMAKRKADELEDFAGKHEEGYVQASKEEVEDGSRMLKEVLAKWKEEVQSK
GLTKKQQVERMRELVKENPKLMANGFFKGIQAL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccgaccagaaatcaaagaggaggacgagtcaggcttctgcaagttcttccgc
aacttgcctgacaaagatgacgagacggtgcgcatcttcgaccggggtgactactacagc
gcccatggcgaagatgccaagttcattgcaaacacagtttacaaaactacagccgtcatc
cgtaagctgggacgggaaccgggcctggaatcggttaccatgaccatcaccgttttccgc
aacttcctccgcgacgcactcttcagactcagcaaacgtatcgagatatggcaatctaca
ggcaagcggatggactggaaggtggtcaagcaggcctcacccggtaatctgcaggaccta
gaagacgaactgggtggtcaaatcgagaatgcaccaataatattagcggtcaaagtgtca
gcaaaagcatcagaagcgcgcaatgtgggcgtgtgcttcgcagacgcaagtgtacgagag
cttggcgtcacagagttcctcgacaacgacctctactccaacttcgaatcgcttctgatt
cagctgggcgtaaaagagtgcctgatacaggtcgatacatctaagaaggatgtggagctg
ggcaaacttcggaccatcgccgacaactgcggttgtgcggtagcagagcggtcggcgacg
gactttggcacaaaggacatcgaacaggatctcccgcggctactgaaggacgaacgggca
gctggctcgttgccattgacagacctaaagctagctatgggctcggctgcatgcttgatc
cggtacctaggagtcatgtcagactcttcaaacttcggacaataccaactctaccaacac
gacctctcacaatacatgaagctcgatgctgcggcgctgaaagcactcaacctcatgcct
ggaccacgagacggcgcaaagaacatgagcttgtacgggctactcaaccactgcaagaca
cctactggtagccgactactagcacaatggctgaagcagcctctgatgaatgtcaaggac
atcgagcgacggcagcagctggttgaggccttcgtcaacgacactgagctgagacagacg
atgcaagaagaacacttacgttcaataccagatctgtaccgacttgcaaagaagtttcaa
cgcaaggccgcaaacttggaagatgttgtgcgagcatatcaagtcgtcatccggttacca
ggctttctcagctcccttgaagcggtcatggacgagcagtacaaggagccgctcgatgcg
gagtacacagataagctccgccaatacatgacagcattcgcaggactacaagacatggtg
gagacgacagtggatctcgaagcgctcgacaaccacgagtttatcatcaaacctgagttc
gatgaatcgttgaagactatccggaagcgtctggataagctcaagcgcgacatggagtca
gagcatatgcgtgtgggcgatgacctcaatcaagacactgataagaagctttttctggaa
aaccacaaggtcaatggctggtgcttccgactgactcgtaacgaagccggctgtatcaga
caaaagaagcaataccaggagatctcgacacagaagaacggtgtctacttcaccaccaac
acactacaggaaaagcgaagagagttcgaccaactctccgaaaattacaaccgcactcaa
tccggtctcgtcaatgaagtcgtctcagtagcatcatcctacgtccccgtcgtcgagaaa
cttgccgccgtgctcgcacacctcgatgtcatcgtctccttcgcccacgtctctgttcac
gcaccaacctcctacgtcagacccacaatgcacgcgcgcggcactggcaacaccgtactg
aaagaggcacgccacccttgcatggagcagcaagacgacatatccttcattacaaatgat
gtctcactcgtacgcgactccagcgaattcctgatcatcactggtcccaacatgggtgga
aagtctacatatatccgccagattggcgtcatcgctctcatggcacagatcggctgtttc
gtcccatgttcagaagctgagttgaccatctttgactgtatacttgcccgtgtcggtgca
agcgacagccagatcaagggtgtgtcaaccttcatggccgagatgttggaaacagcaaac
attctcaaatctgcaacaaaagagtcgctcatcatcatcgacgagcttggtcgcggaaca
agtacgtacgatggttttggtcttgcctgggcgatttccgaatacatcgtgaaggaaatt
ggtgctttcgcgttgttcgccacgcatttccatgagttgaccgcgctagtggacacatat
ccacaggtgcagaatctacacgtcgtagcccacatctcagaaggcactgctcctgccaat
ggtgatgcagatgctgacgtcgacatggacgccgccgctgtgcagaagaaacgcgaagtt
actctcctatacaaagtcgaacctggcttctcagatcagtctttcggtatccacgtcgca
gaactcgtccgtttcccacaaaaggtcattaacatggcgaagcggaaagcagatgaacta
gaggattttgcaggtaaacatgaggaaggttacgtgcaagcgagtaaggaggaggtggag
gacggaagtcgcatgctgaaagaagtattggcgaagtggaaggaagaggtacagagcaag
gggctaacgaagaagcaacaagtagagaggatgagggagctggtcaaggaaaacccgaag
ctcatggcgaatgggttcttcaagggcattcaggccttgtga
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